Factsheet for AT2G40620.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016980.1-P	Field mustard	nucleus	84.47	90.64
CDY06974	Canola	nucleus	86.38	90.06
CDX93167	Canola	nucleus	83.92	89.8
CDX79976	Canola	nucleus	83.92	86.52
Bra004582.1-P	Field mustard	nucleus	83.65	86.24
CDY23889	Canola	nucleus	83.38	86.2
PGSC0003DMT400042946	Potato	plastid	54.77	62.04
VIT_13s0067g02900.t01	Wine grape	nucleus	59.67	61.0
Solyc06g048630.2.1	Tomato	nucleus	55.86	58.74
PGSC0003DMT400070968	Potato	nucleus	55.86	58.74
Solyc06g049040.2.1	Tomato	nucleus	52.86	58.61
KRH53733	Soybean	nucleus	23.16	48.3
KRH64202	Soybean	nucleus	38.42	47.64
AT1G06850.1	Thale cress	nucleus	43.05	46.88
AT2G31370.6	Thale cress	nucleus	36.24	33.42
AT1G43700.1	Thale cress	nucleus	29.43	31.67
AT1G06070.1	Thale cress	nucleus	36.24	31.44
AT2G13150.1	Thale cress	plastid	17.44	24.43
AT4G38900.1	Thale cress	nucleus	35.42	23.51
AT2G12900.1	Thale cress	plastid	16.89	23.48
AT2G12940.1	Thale cress	plastid	18.53	23.13
AT2G21230.3	Thale cress	nucleus	31.06	21.71
AT2G42380.2	Thale cress	nucleus, plastid	18.26	20.87
AT3G58120.1	Thale cress	nucleus	18.53	20.67
AT1G58110.2	Thale cress	nucleus	17.44	17.11
AT1G35490.1	Thale cress	nucleus	12.81	15.67
AT5G04840.1	Thale cress	plastid	12.81	15.31
AT4G06598.1	Thale cress	nucleus	10.63	14.72

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:818657	UniProt:A0A178VZR1	ProteinID:AAB87576.1	ProteinID:AEC09855.1
ArrayExpress:AT2G40620	EnsemblPlantsGene:AT2G40620	RefSeq:AT2G40620	TAIR:AT2G40620	RefSeq:AT2G40620-TAIR-G	EnsemblPlants:AT2G40620.1
TAIR:AT2G40620.1	EMBL:AY074269	EMBL:AY096746	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0005737	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043621
GO:GO:0048471	InterPro:IPR004827	RefSeq:NP_181594.1	UniProt:O22873	ProteinID:OAP11448.1	PFAM:PF00170
PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016
PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PFscan:PS50217	PANTHER:PTHR13690
PANTHER:PTHR13690:SF103	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI00000A074C	EMBL:Z86093	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

BZIP18bZIP transcription factor 18 [Source:UniProtKB/Swiss-Prot;Acc:O22873]

Coordinates

chr2:-:16954418..16957183

Molecular Weight (calculated)

40669.0 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.904

Length

367 amino acids

Sequence
(BLAST)

001: MEDPSNPQPN QSNLSQCPPL ATAPTPAPVR GPYHRRAHSE VQFRLPEDLD LSEPFGGFDE LGSEDDLFCS YMDIEKLGSG SGSASDSAGP SAPRSDNPFS
101: AENGGAEAGN SRPRHRHSLS VDGSSTLESI EAKKAMAPDK LAELWVVDPK RAKRIIANRQ SAARSKERKA RYILELERKV QTLQTEATTL SAQLSLFQRD
201: TTGLSSENTE LKLRLQVMEQ QAKLRDALNE QLKKEVERLK FATGEVSPAD AYNLGMAHMQ YQQQPQQSFF QHHHQQQTDA QNLQQMTHQF HLFQPNNNQN
301: QSSRTNPPTA HQLMHHATSN APAQSHSYSE AMHEDHLGRL QGLDISSCGR GSNFGRSDTV SESSSTM

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.