Factsheet for AT2G12940.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G13150.1	Thale cress	plastid	72.11	80.92
AT2G12900.1	Thale cress	plastid	59.52	66.29
AT4G38900.1	Thale cress	nucleus	36.39	19.35
AT2G21230.3	Thale cress	nucleus	33.67	18.86
OQU89248	Sorghum	nucleus	15.31	18.67
AT2G40620.1	Thale cress	nucleus	23.13	18.53
AT1G43700.1	Thale cress	nucleus	20.75	17.89
AT1G06850.1	Thale cress	nucleus	20.07	17.51
AT1G06070.1	Thale cress	nucleus	23.47	16.31
AT2G31370.6	Thale cress	nucleus	21.43	15.83
Bra031173.1-P	Field mustard	plastid	20.75	15.76
CDX82009	Canola	plastid	20.41	15.67
HORVU5Hr1G080140.1	Barley	nucleus, plastid	24.49	15.62
CDY13828	Canola	plastid	20.41	15.5
TraesCS5D01G315400.1	Wheat	plastid	24.49	15.42
CDY70502	Canola	nucleus	20.07	15.29
TraesCS5B01G308800.1	Wheat	plastid	24.15	15.2
TraesCS5A01G308400.1	Wheat	nucleus	24.49	14.12
AT2G42380.2	Thale cress	nucleus, plastid	15.31	14.02
AT3G58120.1	Thale cress	nucleus	15.65	13.98
Os04t0181300-00	Rice	nucleus	18.71	12.91
Os09t0520400-01	Rice	nucleus	18.71	12.33
AT1G58110.2	Thale cress	nucleus	13.61	10.7
AT4G06598.1	Thale cress	nucleus	9.52	10.57
AT5G04840.1	Thale cress	plastid	10.54	10.1
AT1G35490.1	Thale cress	nucleus	9.52	9.33
Zm00001d007364_P001	Maize	nucleus	19.73	9.11
OQU83493	Sorghum	nucleus	22.79	8.77
OQU83785	Sorghum	plastid	17.35	7.89

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:815775	ProteinID:AAD20648.1	ProteinID:AEC06212.1	ArrayExpress:AT2G12940
EnsemblPlantsGene:AT2G12940	RefSeq:AT2G12940	TAIR:AT2G12940	RefSeq:AT2G12940-TAIR-G	EnsemblPlants:AT2G12940.1	TAIR:AT2G12940.1
Unigene:At.40699	ncoils:Coil	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009567	GO:GO:0009987	InterPro:IPR004827	RefSeq:NP_178948.5	PFAM:PF07716
PFscan:PS50217	PANTHER:PTHR13690	PANTHER:PTHR13690:SF76	UniProt:Q9SKF8	SMART:SM00338	SUPFAM:SSF57959
Symbol:UNE4	UniParc:UPI00000A6CBB	InterPro:bZIP	SEG:seg	:	:

Description

UNE4Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKF8]

Coordinates

chr2:+:5317475..5319090

Molecular Weight (calculated)

33321.9 Da

IEP (calculated)

9.603

GRAVY (calculated)

-0.764

Length

294 amino acids

Sequence
(BLAST)

001: MNGSDNTTPS RPWSITQPSL AFSSLPPLSP SPSSSRRNSL PLMNPSTSME SRDSSMRFKK NSLLPPLGVK KIAPKDIGPL KRHYRSVSMD SCLSDLLKLT
101: PSPGNTPSSR LVDGDQNASR LEFDANDYTD DELNKIAKSN KLKEVALDPK EVRRILKNRE SAAHLKQKKL QYMINLEHRI NFVENENASI FEKIKLLEND
201: KTMMMNEKKE IMIRIESMEI QAQLRDVLTE HLHGESERLK AALISNENGN GKVQKLRMAT CEVLQNRHEF DKSNMEVMDS NMINWSQPNP GFNG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.