CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82009	Canola	plastid	96.11	96.87
CDY13828	Canola	plastid	89.64	89.41
AT2G13150.1	Thale cress	plastid	15.29	22.52
CDY19094	Canola	nucleus	18.39	22.33
CDY06974	Canola	nucleus	19.95	21.88
CDX93167	Canola	nucleus	19.43	21.87
CDX82008	Canola	nucleus	20.47	21.24
CDY13830	Canola	nucleus, plastid	16.84	21.17
CDY15909	Canola	plastid	24.09	20.95
CDY23889	Canola	nucleus	19.17	20.85
CDX79976	Canola	nucleus	18.91	20.51
CDX99610	Canola	nucleus	23.32	20.36
CDY48943	Canola	nucleus	12.69	20.33
AT2G12940.1	Thale cress	plastid	15.29	20.07
CDX90298	Canola	nucleus	22.54	19.86
CDX86512	Canola	nucleus	16.32	19.81
CDX72732	Canola	nucleus	22.28	19.5
CDX71974	Canola	nucleus, plastid	13.47	19.48
CDY15381	Canola	nucleus	18.65	19.46
CDY64520	Canola	nucleus, plastid	13.73	19.41
CDY06231	Canola	nucleus	16.32	19.38
CDY06053	Canola	nucleus	14.25	19.37
CDY15590	Canola	nucleus	16.06	19.31
CDY12108	Canola	nucleus	21.24	19.25
CDY10799	Canola	nucleus	18.39	19.14
CDY22407	Canola	nucleus	22.02	19.1
CDY56611	Canola	nucleus	18.13	19.02
CDX71000	Canola	nucleus, plastid	13.73	19.0
CDX79872	Canola	nucleus, plastid	13.73	18.93
CDY09952	Canola	nucleus	16.06	18.9
CDY24896	Canola	nucleus	16.58	18.88
CDY22561	Canola	nucleus, plastid	12.95	18.66
CDX80722	Canola	nucleus	15.54	18.63
CDY07597	Canola	nucleus	16.06	18.56
CDY71925	Canola	nucleus	12.18	18.5
CDY15560	Canola	nucleus	18.13	18.37
CDY10170	Canola	nucleus	18.65	18.32
CDY35379	Canola	nucleus, plastid	12.69	18.28
CDY13829	Canola	cytosol	0.52	18.18
CDY35020	Canola	nucleus	8.29	18.18
CDY47713	Canola	nucleus	18.13	17.86
CDX86537	Canola	nucleus	18.13	17.81
AT2G12900.1	Thale cress	plastid	12.18	17.8
CDX98266	Canola	nucleus, plastid	13.73	17.79
CDY30752	Canola	nucleus	14.77	17.27
CDY46864	Canola	nucleus	14.25	16.47
CDY23807	Canola	nucleus	14.25	16.37
TraesCS5B01G308800.1	Wheat	plastid	19.43	16.06
HORVU5Hr1G080140.1	Barley	nucleus, plastid	19.17	16.05
TraesCS5D01G315400.1	Wheat	plastid	19.17	15.85
TraesCS5A01G308400.1	Wheat	nucleus	19.43	14.71
Os09t0520400-01	Rice	nucleus	16.84	14.57
Os04t0181300-00	Rice	nucleus	16.06	14.55
CDY29162	Canola	nucleus	13.99	14.44
CDX80717	Canola	nucleus, plastid	11.92	14.38
CDY39913	Canola	nucleus	13.73	14.29
CDY48939	Canola	nucleus	11.4	14.24
OQU89248	Sorghum	nucleus	8.55	13.69
CDY56238	Canola	extracellular	4.4	12.69
CDY44883	Canola	mitochondrion, nucleus	9.84	12.42
CDX70198	Canola	mitochondrion, nucleus	9.59	12.05
Zm00001d007364_P001	Maize	nucleus	17.36	10.52
OQU83493	Sorghum	nucleus	18.39	9.29
OQU83785	Sorghum	plastid	12.95	7.74

Protein Annotations

MapMan:15.5.4.1	GO:A0A078JXW6	UniProt:A0A078JXW6	EnsemblPlants:CDY70502	ProteinID:CDY70502	ProteinID:CDY70502.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00003914001	InterPro:IPR004827	PFAM:PF00170
PFscan:PS50217	PANTHER:PTHR13690	PANTHER:PTHR13690:SF76	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0004EF1E43
InterPro:bZIP	SEG:seg	:	:	:	:

Description

BnaAnng33910DBnaAnng33910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXW6]

Coordinates

chrLK042314:+:1265..2923

Molecular Weight (calculated)

43336.0 Da

IEP (calculated)

8.737

GRAVY (calculated)

-0.858

Length

386 amino acids

Sequence
(BLAST)

001: MDRQAENVPS QTSFVLSTQF PCPPSGQNRG SMPPPRRSSL PPLPPKRPTT TTTTRHQQIG LQNFNPGPRL LPPQSPVFRS WTPMSSPAPS SSFQYLQSAP
101: PVAYHNAALP PRPPTTSVSA RGSAYSGNDS AVFPSMDAMK MIYPEPIEMP VGVNYSKEGH GEPAGFMDEQ VYMDLDEIFD FSTKDDDVAR IGSGSSENNK
201: RNAGVKKRAA PSRKTRRKSV SPSVDCNNLN NWKSSVAIEK GMFTESQMNE IARSKTLQKY VVTDPKYAKR MLSNREGARR SVKRTAQHIL NLEEKVQTLE
301: KEGVTLTVHT SFAEKKKLGL EEENKQLRIR LQEIQDQSKR ANEINWVKQK GTEEVFPDWD TTMDEFLLEQ LNELNEEPET NNCGFE

Best Arabidopsis Sequence Match ( AT4G38900.2 )
(BLAST)

001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.