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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031172.1-P Field mustard nucleus 91.94 90.96
CDY13829 Canola cytosol 2.69 90.91
CDY13830 Canola nucleus, plastid 74.19 89.9
CDX99610 Canola nucleus 65.32 54.98
CDY15909 Canola plastid 65.59 54.95
VIT_18s0001g13740.t01 Wine grape nucleus 17.74 50.0
AT2G21230.3 Thale cress nucleus 67.74 48.0
TraesCS5A01G491600.1 Wheat nucleus 24.73 35.94
CDY12108 Canola nucleus 40.59 35.45
TraesCS4D01G316900.1 Wheat nucleus 24.19 34.75
CDX90298 Canola nucleus 40.86 34.7
OQU92255 Sorghum nucleus 28.23 34.43
CDX72732 Canola nucleus 40.59 34.24
CDY22407 Canola nucleus 39.52 33.03
Zm00001d048455_P001 Maize nucleus 29.57 32.64
TraesCS1D01G191000.1 Wheat nucleus, plastid 33.06 31.87
TraesCS1B01G193800.1 Wheat nucleus 33.06 31.7
Zm00001d029711_P001 Maize nucleus 33.6 31.49
Os10t0531900-01 Rice nucleus 33.6 31.25
TraesCS1A01G186000.1 Wheat plastid 32.8 31.2
CDY19094 Canola nucleus 26.08 30.5
Os03t0127500-00 Rice nucleus 34.41 30.05
Zm00001d027461_P001 Maize plastid 33.6 29.34
Solyc04g081190.2.1 Tomato nucleus 34.95 29.28
PGSC0003DMT400009538 Potato nucleus 34.95 29.28
CDY35020 Canola nucleus 13.71 28.98
KXG40277 Sorghum nucleus 33.33 28.77
HORVU4Hr1G053410.2 Barley cytosol 29.03 28.42
CDX86512 Canola nucleus 24.19 28.3
CDY48943 Canola nucleus 18.28 28.22
CDY15590 Canola nucleus 24.19 28.04
CDY10799 Canola nucleus 27.69 27.76
CDY56611 Canola nucleus 27.42 27.72
CDY06231 Canola nucleus 24.19 27.69
CDY15381 Canola nucleus 27.42 27.57
CDY09952 Canola nucleus 24.19 27.44
HORVU4Hr1G083000.1 Barley nucleus 28.76 27.44
GSMUA_Achr1P08090_001 Banana nucleus, plastid 34.14 27.25
TraesCS4B01G320400.1 Wheat nucleus 29.03 27.0
CDX86537 Canola nucleus 28.23 26.72
CDY15560 Canola nucleus 26.88 26.25
CDX93167 Canola nucleus 23.92 25.95
CDY06974 Canola nucleus 24.19 25.57
CDY23889 Canola nucleus 24.19 25.35
KRH61066 Soybean nucleus, plastid 34.68 25.15
CDY30752 Canola nucleus 22.04 24.85
CDY71925 Canola nucleus 16.94 24.8
CDX79976 Canola nucleus 23.66 24.72
CDY10170 Canola nucleus 26.08 24.68
CDX80722 Canola nucleus 21.24 24.53
CDY47713 Canola nucleus 25.81 24.49
CDY24896 Canola nucleus 22.31 24.48
KRH05913 Soybean nucleus 35.75 24.05
KRH17396 Soybean nucleus 35.22 23.43
CDY07597 Canola nucleus 19.89 22.16
CDY64520 Canola nucleus, plastid 15.86 21.61
CDX71974 Canola nucleus, plastid 15.32 21.35
CDY22561 Canola nucleus, plastid 15.32 21.27
CDX71000 Canola nucleus, plastid 15.86 21.15
CDX79872 Canola nucleus, plastid 15.86 21.07
KRH51734 Soybean nucleus 22.31 20.7
CDX82009 Canola plastid 21.24 20.63
CDY35379 Canola nucleus, plastid 14.78 20.52
CDY70502 Canola nucleus 21.24 20.47
CDY06053 Canola nucleus 15.59 20.42
CDY13828 Canola plastid 21.24 20.41
CDX98266 Canola nucleus, plastid 15.32 19.13
CDY56238 Canola extracellular 6.72 18.66
CDY46864 Canola nucleus 16.4 18.26
CDY23807 Canola nucleus 16.4 18.15
CDY48939 Canola nucleus 13.71 16.5
CDY39913 Canola nucleus 16.13 16.17
CDX80717 Canola nucleus, plastid 13.71 15.94
CDY29162 Canola nucleus 15.86 15.78
HORVU1Hr1G049310.2 Barley nucleus 17.2 14.92
CDX70198 Canola mitochondrion, nucleus 11.83 14.33
CDY44883 Canola mitochondrion, nucleus 11.56 14.05
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1GO:A0A078D413EnsemblPlants:CDX82008ProteinID:CDX82008ProteinID:CDX82008.1
ncoils:CoilGO:GO:0003674GO:GO:0003700GO:GO:0006139GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00136988001InterPro:IPR004827PFAM:PF00170
PFscan:PS50217PANTHER:PTHR13690PANTHER:PTHR13690:SF76SMART:SM00338SUPFAM:SSF57959UniParc:UPI0004EDEB36
InterPro:bZIPSEG:seg::::
Description
BnaC08g35930D
Coordinates
chrLK031826:-:1881059..1882737
Molecular Weight (calculated)
41309.6 Da
IEP (calculated)
10.270
GRAVY (calculated)
-0.781
Length
372 amino acids
Sequence
(BLAST)
001: MQRPNSSSSS LNPSPIRFPV PFTGNRVGAP PPPPIPPTFQ PKHSFPAAAV EERTGAGFSP SLPPSPFTMY HSTSRVVAGG SGNLPPRKTS HRRSNSDHTF
101: VFSSMSPSKS LERPVSGCGE VSDWSKLVKE EERRTLSEGY DDALRAYMRL DQIDAESSRG RTRKMTNGGS TSGDSEGESN VKRRAGGDIS PTSRHYRSVS
201: VDSCCFREGA YSVGFGKYEF SAADMKKIAA DEKLAGIVMA DPKRVKRMLA NRASAARSKD RETKYIAQLE HKVQTLQIET TTLSAHLTHL QRDNMGLQNQ
301: NSELKFRLQS MERQTQLRNA LSEKLTEEVQ RLRLVIGVPN RSESNISNAS LTPEMFQQQL RISQLQHPHY NE
Best Arabidopsis Sequence Match ( AT2G21230.1 )
(BLAST)
001: MGGGGDTTDT NMMQRVNSSS GTSSSSIPKH NLHLNPALIR SHHHFRHPFT GAPPPPIPPI SPYSQIPATL QPRHSRSMSQ PSSFFSFDSL PPLNPSAPSV
101: SVSVEEKTGA GFSPSLPPSP FTMCHSSSSR NAGDGENLPP RKSHRRSNSD VTFGFSSMMS QNQKSPPLSS LERSISGEDT SDWSNLVKKE PREGFYKGRK
201: PEVEAAMDDV FTAYMNLDNI DVLNSFGGED GKNGNENVEE MESSRGSGTK KTNGGSSSDS EGDSSASGNV KVALSSSSSG VKRRAGGDIA PTGRHYRSVS
301: MDSCFMGKLN FGDESSLKLP PSSSAKVSPT NSGEGNSSAY SVEFGNSEFT AAEMKKIAAD EKLAEIVMAD PKRVKRILAN RVSAARSKER KTRYMAELEH
401: KVQTLQTEAT TLSAQLTHLQ RDSMGLTNQN SELKFRLQAM EQQAQLRDAL SEKLNEEVQR LKLVIGEPNR RQSGSSSSES KMSLNPEMFQ QLSISQLQHQ
501: QMQHSNQCST MKAKHTSND
Arabidopsis Description
Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:B3H7M2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.