Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015471.1-P | Field mustard | nucleus | 99.74 | 99.74 |
| CDY10170 | Canola | nucleus | 96.43 | 96.18 |
| CDX86537 | Canola | nucleus | 81.12 | 80.92 |
| CDY15560 | Canola | nucleus | 78.06 | 80.31 |
| AT1G06070.1 | Thale cress | nucleus | 85.97 | 79.67 |
| CDY10799 | Canola | nucleus | 66.07 | 69.81 |
| CDY56611 | Canola | nucleus | 64.54 | 68.75 |
| CDY15381 | Canola | nucleus | 64.29 | 68.11 |
| CDY19094 | Canola | nucleus | 54.08 | 66.67 |
| VIT_05s0102g01120.t01 | Wine grape | nucleus | 67.6 | 62.35 |
| Solyc06g053350.2.1 | Tomato | plastid | 65.31 | 58.99 |
| GSMUA_Achr11P... | Banana | nucleus | 54.08 | 56.68 |
| KRH29611 | Soybean | nucleus | 55.36 | 56.36 |
| Zm00001d021189_P001 | Maize | nucleus | 52.3 | 55.41 |
| TraesCS5B01G301900.1 | Wheat | nucleus | 53.06 | 55.17 |
| TraesCS5A01G299400.1 | Wheat | nucleus | 52.81 | 54.91 |
| EER99183 | Sorghum | nucleus | 54.85 | 54.85 |
| TraesCS5D01G308600.1 | Wheat | nucleus | 52.55 | 54.79 |
| KRH24606 | Soybean | nucleus | 55.36 | 54.66 |
| Zm00001d006127_P003 | Maize | nucleus | 51.53 | 54.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.1 | 54.14 |
| Os09t0516200-01 | Rice | nucleus | 52.3 | 53.95 |
| GSMUA_Achr5P25700_001 | Banana | nucleus | 48.47 | 53.52 |
| HORVU7Hr1G056230.2 | Barley | nucleus | 47.96 | 51.51 |
| GSMUA_Achr11P... | Banana | nucleus | 58.42 | 51.12 |
| TraesCS7A01G266400.1 | Wheat | nucleus | 46.94 | 50.41 |
| TraesCS7B01G166100.1 | Wheat | nucleus | 47.19 | 50.0 |
| TraesCS7D01G268400.1 | Wheat | nucleus | 45.66 | 48.64 |
| TraesCS2A01G352100.1 | Wheat | nucleus | 46.17 | 48.53 |
| EES12438 | Sorghum | nucleus | 46.43 | 48.15 |
| Zm00001d003180_P001 | Maize | nucleus | 44.39 | 47.15 |
| HORVU5Hr1G079160.11 | Barley | vacuole | 53.06 | 46.74 |
| Zm00001d031697_P001 | Maize | nucleus | 29.34 | 46.18 |
| HORVU2Hr1G085560.4 | Barley | nucleus, plastid | 44.39 | 45.08 |
| EES14151 | Sorghum | nucleus | 43.88 | 45.03 |
| Zm00001d052717_P001 | Maize | nucleus | 43.11 | 44.13 |
| CDY48943 | Canola | nucleus | 24.49 | 39.83 |
| CDY35020 | Canola | nucleus | 17.86 | 39.77 |
| CDX86512 | Canola | nucleus | 32.14 | 39.62 |
| CDY15590 | Canola | nucleus | 32.4 | 39.56 |
| CDX93167 | Canola | nucleus | 33.93 | 38.78 |
| CDY06974 | Canola | nucleus | 34.69 | 38.64 |
| CDY06231 | Canola | nucleus | 31.38 | 37.85 |
| CDY09952 | Canola | nucleus | 31.38 | 37.5 |
| CDX79976 | Canola | nucleus | 33.67 | 37.08 |
| CDY23889 | Canola | nucleus | 33.42 | 36.9 |
| CDX80722 | Canola | nucleus | 29.08 | 35.4 |
| CDY24896 | Canola | nucleus | 29.59 | 34.22 |
| CDY30752 | Canola | nucleus | 28.32 | 33.64 |
| CDY71925 | Canola | nucleus | 21.68 | 33.46 |
| CDY07597 | Canola | nucleus | 28.32 | 33.23 |
| CDY13830 | Canola | nucleus, plastid | 23.21 | 29.64 |
| CDY15909 | Canola | plastid | 31.38 | 27.7 |
| CDX72732 | Canola | nucleus | 31.12 | 27.66 |
| CDY12108 | Canola | nucleus | 29.59 | 27.23 |
| CDY22407 | Canola | nucleus | 30.61 | 26.97 |
| CDX90298 | Canola | nucleus | 29.85 | 26.71 |
| CDX99610 | Canola | nucleus | 30.1 | 26.7 |
| CDX82008 | Canola | nucleus | 24.49 | 25.81 |
| CDY64520 | Canola | nucleus, plastid | 17.6 | 25.27 |
| CDX71000 | Canola | nucleus, plastid | 17.86 | 25.09 |
| CDX79872 | Canola | nucleus, plastid | 17.86 | 25.0 |
| CDY06053 | Canola | nucleus | 18.11 | 25.0 |
| CDX71974 | Canola | nucleus, plastid | 16.84 | 24.72 |
| CDY22561 | Canola | nucleus, plastid | 16.58 | 24.25 |
| CDY35379 | Canola | nucleus, plastid | 16.07 | 23.51 |
| CDX98266 | Canola | nucleus, plastid | 17.6 | 23.15 |
| CDY56238 | Canola | extracellular | 7.91 | 23.13 |
| CDY46864 | Canola | nucleus | 17.86 | 20.96 |
| CDY23807 | Canola | nucleus | 17.86 | 20.83 |
| CDY39913 | Canola | nucleus | 18.37 | 19.41 |
| CDY29162 | Canola | nucleus | 18.37 | 19.25 |
| CDX82009 | Canola | plastid | 18.11 | 18.54 |
| CDY70502 | Canola | nucleus | 17.86 | 18.13 |
| CDY13828 | Canola | plastid | 17.86 | 18.09 |
| CDX80717 | Canola | nucleus, plastid | 14.54 | 17.81 |
| CDY48939 | Canola | nucleus | 14.03 | 17.8 |
| CDX70198 | Canola | mitochondrion, nucleus | 13.01 | 16.61 |
| CDY44883 | Canola | mitochondrion, nucleus | 12.5 | 16.01 |
| CDY13829 | Canola | cytosol | 0.26 | 9.09 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078IEV2 | UniProt:A0A078IEV2 | EnsemblPlants:CDY47713 | ProteinID:CDY47713 |
| ProteinID:CDY47713.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00087979001 | InterPro:IPR004827 | PFAM:PF00170 | PFscan:PS50217 | PANTHER:PTHR13690 |
| PANTHER:PTHR13690:SF80 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EF0A73 | InterPro:bZIP | SEG:seg |
Description
BnaA10g04020DBnaA10g04020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IEV2]
Coordinates
chrLK032731:-:66087..68079
Molecular Weight (calculated)
43128.9 Da
IEP (calculated)
6.594
GRAVY (calculated)
-0.914
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKEKSPSGG LPPPSGRYSS FPHLTPPPSG SSDANRFSHD ISRMPDNPPK NLGHRRAHSE ILTLPDDLSF DSDLGVVGGA ADGPSFSDDA DEDLMSMYLD
101: MDKFNSSASS SCEPAELVWR NELGSTTTPG GGGGSSERPR IRHQHSQSMD GSTSLMSGSE DVSGGVDSKK AISAAKLSEL ALIDPKRAKR IWANRQSAAR
201: SKERKMRYIA ELERKVQTLQ TEATTLSAQL TLLQRDTNGL SVENHELKLR VQTVEQQVHL QDALNDALKE EVQHLKVLTG QGVSNGGASS VMNYGSFGSS
301: NQQFYTNNQS RHTMQAAQQF QQLQIHSQKQ QQQQQFQFQQ QQQLYQLQLQ QQRIQQQEQQ SGGAEPRRPM SSSGQKESAT SSPDLEFPST KN
101: MDKFNSSASS SCEPAELVWR NELGSTTTPG GGGGSSERPR IRHQHSQSMD GSTSLMSGSE DVSGGVDSKK AISAAKLSEL ALIDPKRAKR IWANRQSAAR
201: SKERKMRYIA ELERKVQTLQ TEATTLSAQL TLLQRDTNGL SVENHELKLR VQTVEQQVHL QDALNDALKE EVQHLKVLTG QGVSNGGASS VMNYGSFGSS
301: NQQFYTNNQS RHTMQAAQQF QQLQIHSQKQ QQQQQFQFQQ QQQLYQLQLQ QQRIQQQEQQ SGGAEPRRPM SSSGQKESAT SSPDLEFPST KN
001: MDKEKSPAPP PSGGLPPPSG RYSAFSPNGS SFAMKAESSF PPLTPSGSNS SDANRFSHDI SRMPDNPPKN LGHRRAHSEI LTLPDDLSFD SDLGVVGAAD
101: GPSFSDDTDE DLLYMYLDME KFNSSATSTS QMGEPSEPTW RNELASTSNL QSTPGSSSER PRIRHQHSQS MDGSTTIKPE MLMSGNEDVS GVDSKKAISA
201: AKLSELALID PKRAKRIWAN RQSAARSKER KMRYIAELER KVQTLQTEAT SLSAQLTLLQ RDTNGLGVEN NELKLRVQTM EQQVHLQDAL NDALKEEVQH
301: LKVLTGQGPS NGTSMNYGSF GSNQQFYPNN QSMHTILAAQ QLQQLQIQSQ KQQQQQQQHQ QQQQQQQQQF HFQQQQLYQL QQQQRLQQQE QQSGASELRR
401: PMPSPGQKES VTSPDRETPL TKD
101: GPSFSDDTDE DLLYMYLDME KFNSSATSTS QMGEPSEPTW RNELASTSNL QSTPGSSSER PRIRHQHSQS MDGSTTIKPE MLMSGNEDVS GVDSKKAISA
201: AKLSELALID PKRAKRIWAN RQSAARSKER KMRYIAELER KVQTLQTEAT SLSAQLTLLQ RDTNGLGVEN NELKLRVQTM EQQVHLQDAL NDALKEEVQH
301: LKVLTGQGPS NGTSMNYGSF GSNQQFYPNN QSMHTILAAQ QLQQLQIQSQ KQQQQQQQHQ QQQQQQQQQF HFQQQQLYQL QQQQRLQQQE QQSGASELRR
401: PMPSPGQKES VTSPDRETPL TKD
Arabidopsis Description
At1g06070 [Source:UniProtKB/TrEMBL;Acc:Q9LNE0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.