Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004582.1-P | Field mustard | nucleus | 99.72 | 99.72 |
| CDY23889 | Canola | nucleus | 96.91 | 97.18 |
| CDX93167 | Canola | nucleus | 87.36 | 90.67 |
| CDY06974 | Canola | nucleus | 89.04 | 90.06 |
| AT2G40620.1 | Thale cress | nucleus | 86.52 | 83.92 |
| CDY24896 | Canola | nucleus | 72.19 | 75.81 |
| CDY07597 | Canola | nucleus | 67.7 | 72.16 |
| PGSC0003DMT400042946 | Potato | plastid | 56.46 | 62.04 |
| VIT_13s0067g02900.t01 | Wine grape | nucleus | 58.99 | 58.5 |
| Solyc06g049040.2.1 | Tomato | nucleus | 54.21 | 58.31 |
| PGSC0003DMT400070968 | Potato | nucleus | 56.46 | 57.59 |
| Solyc06g048630.2.1 | Tomato | nucleus | 56.18 | 57.31 |
| CDY35020 | Canola | nucleus | 28.09 | 56.82 |
| CDX86512 | Canola | nucleus | 45.51 | 50.94 |
| CDY15590 | Canola | nucleus | 45.51 | 50.47 |
| CDY06231 | Canola | nucleus | 45.51 | 49.85 |
| CDY09952 | Canola | nucleus | 45.79 | 49.7 |
| KRH53733 | Soybean | nucleus | 23.6 | 47.73 |
| KRH64202 | Soybean | nucleus | 39.33 | 47.3 |
| CDY48943 | Canola | nucleus | 25.84 | 38.17 |
| CDY19094 | Canola | nucleus | 32.58 | 36.48 |
| CDY10170 | Canola | nucleus | 37.64 | 34.1 |
| CDY15381 | Canola | nucleus | 35.39 | 34.05 |
| CDY47713 | Canola | nucleus | 37.08 | 33.67 |
| CDY15560 | Canola | nucleus | 35.96 | 33.6 |
| CDY56611 | Canola | nucleus | 34.55 | 33.42 |
| CDY10799 | Canola | nucleus | 34.83 | 33.42 |
| CDX86537 | Canola | nucleus | 35.39 | 32.06 |
| CDX80722 | Canola | nucleus | 28.65 | 31.68 |
| CDY30752 | Canola | nucleus | 28.37 | 30.61 |
| CDY13830 | Canola | nucleus, plastid | 23.88 | 27.69 |
| CDY71925 | Canola | nucleus | 19.38 | 27.17 |
| CDY12108 | Canola | nucleus | 32.3 | 27.0 |
| CDX72732 | Canola | nucleus | 33.43 | 26.98 |
| CDX90298 | Canola | nucleus | 32.58 | 26.48 |
| CDY22407 | Canola | nucleus | 32.87 | 26.29 |
| CDX99610 | Canola | nucleus | 30.06 | 24.21 |
| CDY15909 | Canola | plastid | 30.06 | 24.1 |
| CDX82008 | Canola | nucleus | 24.72 | 23.66 |
| CDY22561 | Canola | nucleus, plastid | 16.85 | 22.39 |
| CDX71974 | Canola | nucleus, plastid | 16.57 | 22.1 |
| CDY64520 | Canola | nucleus, plastid | 16.85 | 21.98 |
| CDX71000 | Canola | nucleus, plastid | 17.13 | 21.86 |
| CDY06053 | Canola | nucleus | 17.42 | 21.83 |
| CDX79872 | Canola | nucleus, plastid | 17.13 | 21.79 |
| CDY35379 | Canola | nucleus, plastid | 16.29 | 21.64 |
| CDY56238 | Canola | extracellular | 8.15 | 21.64 |
| CDX98266 | Canola | nucleus, plastid | 17.13 | 20.47 |
| CDX82009 | Canola | plastid | 20.51 | 19.06 |
| CDY70502 | Canola | nucleus | 20.51 | 18.91 |
| CDY46864 | Canola | nucleus | 16.29 | 17.37 |
| CDY13828 | Canola | plastid | 18.82 | 17.31 |
| CDY23807 | Canola | nucleus | 16.29 | 17.26 |
| CDY39913 | Canola | nucleus | 17.7 | 16.98 |
| CDY29162 | Canola | nucleus | 17.7 | 16.84 |
| CDY48939 | Canola | nucleus | 13.48 | 15.53 |
| CDX80717 | Canola | nucleus, plastid | 13.76 | 15.31 |
| CDX70198 | Canola | mitochondrion, nucleus | 11.8 | 13.68 |
| CDY44883 | Canola | mitochondrion, nucleus | 11.24 | 13.07 |
| CDY13829 | Canola | cytosol | 0.28 | 9.09 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078CS39 | EnsemblPlants:CDX79976 | ProteinID:CDX79976 | ProteinID:CDX79976.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00132841001 | InterPro:IPR004827 | PFAM:PF00170 |
| PFscan:PS50217 | PANTHER:PTHR13690 | PANTHER:PTHR13690:SF103 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EDD440 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BnaA05g01800D
Coordinates
chrLK031819:+:1133302..1135517
Molecular Weight (calculated)
39671.8 Da
IEP (calculated)
6.395
GRAVY (calculated)
-0.926
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDSSNAKSN QCPPPLSNPT PTPFRGPYHR RAHSEVQFRL PEDLDLSEPF GGFDDLGSED DIFCTYMDIE KLGGSGSDSA APKSDNPLFA GEEGGSSSSR
101: PRHRHSLSVD GGSSSLESIE AKKAMAPDKL AELWVVDPKR AKRIIANRQS AARSKERKAR YIMELERKVQ TLQTEATTLS AQLSLFQRDT TGLSSENTEL
201: KLRLQVMEQQ AKLRDALNDQ LKKEVERLKF ATGEVSHADA YNLGMAHMQY SQQQQQPPQQ QSFFQHHHHQ QQQTDAQNLQ QMTHQFHLFQ PNNNNNNQNL
301: NIMHQATSNA SGQSHSFAEA MNEDPLGRLQ GLDISSCGRG SNFGRSDTVS ESSSTM
101: PRHRHSLSVD GGSSSLESIE AKKAMAPDKL AELWVVDPKR AKRIIANRQS AARSKERKAR YIMELERKVQ TLQTEATTLS AQLSLFQRDT TGLSSENTEL
201: KLRLQVMEQQ AKLRDALNDQ LKKEVERLKF ATGEVSHADA YNLGMAHMQY SQQQQQPPQQ QSFFQHHHHQ QQQTDAQNLQ QMTHQFHLFQ PNNNNNNQNL
301: NIMHQATSNA SGQSHSFAEA MNEDPLGRLQ GLDISSCGRG SNFGRSDTVS ESSSTM
001: MEDPSNPQPN QSNLSQCPPL ATAPTPAPVR GPYHRRAHSE VQFRLPEDLD LSEPFGGFDE LGSEDDLFCS YMDIEKLGSG SGSASDSAGP SAPRSDNPFS
101: AENGGAEAGN SRPRHRHSLS VDGSSTLESI EAKKAMAPDK LAELWVVDPK RAKRIIANRQ SAARSKERKA RYILELERKV QTLQTEATTL SAQLSLFQRD
201: TTGLSSENTE LKLRLQVMEQ QAKLRDALNE QLKKEVERLK FATGEVSPAD AYNLGMAHMQ YQQQPQQSFF QHHHQQQTDA QNLQQMTHQF HLFQPNNNQN
301: QSSRTNPPTA HQLMHHATSN APAQSHSYSE AMHEDHLGRL QGLDISSCGR GSNFGRSDTV SESSSTM
101: AENGGAEAGN SRPRHRHSLS VDGSSTLESI EAKKAMAPDK LAELWVVDPK RAKRIIANRQ SAARSKERKA RYILELERKV QTLQTEATTL SAQLSLFQRD
201: TTGLSSENTE LKLRLQVMEQ QAKLRDALNE QLKKEVERLK FATGEVSPAD AYNLGMAHMQ YQQQPQQSFF QHHHQQQTDA QNLQQMTHQF HLFQPNNNQN
301: QSSRTNPPTA HQLMHHATSN APAQSHSYSE AMHEDHLGRL QGLDISSCGR GSNFGRSDTV SESSSTM
Arabidopsis Description
BZIP18bZIP transcription factor 18 [Source:UniProtKB/Swiss-Prot;Acc:O22873]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.