Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021735.1-P | Field mustard | nucleus | 97.8 | 91.74 |
| CDY15381 | Canola | nucleus | 90.25 | 77.57 |
| CDY56611 | Canola | nucleus | 79.56 | 68.75 |
| CDY10799 | Canola | nucleus | 79.56 | 68.19 |
| AT2G31370.6 | Thale cress | nucleus | 79.87 | 63.82 |
| CDY15560 | Canola | nucleus | 65.09 | 54.33 |
| CDY10170 | Canola | nucleus | 66.98 | 54.2 |
| CDX86537 | Canola | nucleus | 66.98 | 54.2 |
| CDY47713 | Canola | nucleus | 66.67 | 54.08 |
| GSMUA_Achr5P25700_001 | Banana | nucleus | 57.23 | 51.27 |
| VIT_05s0102g01120.t01 | Wine grape | nucleus | 66.35 | 49.65 |
| GSMUA_Achr11P... | Banana | nucleus | 55.66 | 47.33 |
| GSMUA_AchrUn_... | Banana | nucleus | 58.8 | 46.87 |
| Zm00001d021189_P001 | Maize | nucleus | 54.09 | 46.49 |
| Solyc06g053350.2.1 | Tomato | plastid | 62.26 | 45.62 |
| Zm00001d006127_P003 | Maize | nucleus | 52.52 | 45.01 |
| Zm00001d031697_P001 | Maize | nucleus | 34.91 | 44.58 |
| TraesCS5B01G301900.1 | Wheat | nucleus | 52.83 | 44.56 |
| TraesCS5A01G299400.1 | Wheat | nucleus | 52.83 | 44.56 |
| KRH29611 | Soybean | nucleus | 53.77 | 44.42 |
| TraesCS5D01G308600.1 | Wheat | nucleus | 52.52 | 44.41 |
| Os09t0516200-01 | Rice | nucleus | 52.52 | 43.95 |
| HORVU7Hr1G056230.2 | Barley | nucleus | 50.31 | 43.84 |
| EER99183 | Sorghum | nucleus | 53.77 | 43.62 |
| GSMUA_Achr11P... | Banana | nucleus | 61.32 | 43.53 |
| KRH24606 | Soybean | nucleus | 53.77 | 43.07 |
| TraesCS7A01G266400.1 | Wheat | nucleus | 48.43 | 42.19 |
| TraesCS7B01G166100.1 | Wheat | nucleus | 48.74 | 41.89 |
| TraesCS7D01G268400.1 | Wheat | nucleus | 47.48 | 41.03 |
| EES14151 | Sorghum | nucleus | 47.17 | 39.27 |
| CDY48943 | Canola | nucleus | 29.56 | 39.0 |
| TraesCS2A01G352100.1 | Wheat | nucleus | 45.6 | 38.87 |
| Zm00001d052717_P001 | Maize | nucleus | 45.6 | 37.86 |
| HORVU5Hr1G079160.11 | Barley | vacuole | 52.83 | 37.75 |
| Zm00001d003180_P001 | Maize | nucleus | 43.4 | 37.4 |
| HORVU2Hr1G085560.4 | Barley | nucleus, plastid | 44.97 | 37.05 |
| EES12438 | Sorghum | nucleus | 43.71 | 36.77 |
| CDX80722 | Canola | nucleus | 35.85 | 35.4 |
| CDY35020 | Canola | nucleus | 19.5 | 35.23 |
| CDX93167 | Canola | nucleus | 37.11 | 34.4 |
| CDY71925 | Canola | nucleus | 27.36 | 34.25 |
| CDY06974 | Canola | nucleus | 37.74 | 34.09 |
| CDX86512 | Canola | nucleus | 33.96 | 33.96 |
| CDY15590 | Canola | nucleus | 34.28 | 33.96 |
| CDY06231 | Canola | nucleus | 34.28 | 33.54 |
| CDY09952 | Canola | nucleus | 34.28 | 33.23 |
| CDY30752 | Canola | nucleus | 34.28 | 33.03 |
| CDY23889 | Canola | nucleus | 36.79 | 32.96 |
| CDX79976 | Canola | nucleus | 36.48 | 32.58 |
| CDY24896 | Canola | nucleus | 32.7 | 30.68 |
| CDY07597 | Canola | nucleus | 31.13 | 29.64 |
| CDY13830 | Canola | nucleus, plastid | 28.3 | 29.32 |
| CDY15909 | Canola | plastid | 36.48 | 26.13 |
| CDX82008 | Canola | nucleus | 30.5 | 26.08 |
| CDX99610 | Canola | nucleus | 35.22 | 25.34 |
| CDX72732 | Canola | nucleus | 34.59 | 24.94 |
| CDY12108 | Canola | nucleus | 32.7 | 24.41 |
| CDY22407 | Canola | nucleus | 33.96 | 24.27 |
| CDY64520 | Canola | nucleus, plastid | 20.44 | 23.81 |
| CDX90298 | Canola | nucleus | 32.7 | 23.74 |
| CDY22561 | Canola | nucleus, plastid | 19.81 | 23.51 |
| CDX71000 | Canola | nucleus, plastid | 20.44 | 23.3 |
| CDY06053 | Canola | nucleus | 20.75 | 23.24 |
| CDX71974 | Canola | nucleus, plastid | 19.5 | 23.22 |
| CDX79872 | Canola | nucleus, plastid | 20.44 | 23.21 |
| CDY35379 | Canola | nucleus, plastid | 19.5 | 23.13 |
| CDX98266 | Canola | nucleus, plastid | 20.13 | 21.48 |
| CDY56238 | Canola | extracellular | 8.81 | 20.9 |
| CDY46864 | Canola | nucleus | 20.44 | 19.46 |
| CDY23807 | Canola | nucleus | 20.44 | 19.35 |
| CDX82009 | Canola | plastid | 22.64 | 18.8 |
| CDY70502 | Canola | nucleus | 22.33 | 18.39 |
| CDY13828 | Canola | plastid | 22.01 | 18.09 |
| CDY39913 | Canola | nucleus | 20.13 | 17.25 |
| CDY29162 | Canola | nucleus | 20.13 | 17.11 |
| CDY48939 | Canola | nucleus | 16.04 | 16.5 |
| CDX80717 | Canola | nucleus, plastid | 16.04 | 15.94 |
| CDX70198 | Canola | mitochondrion, nucleus | 13.52 | 14.01 |
| CDY44883 | Canola | mitochondrion, nucleus | 12.89 | 13.4 |
| CDY13829 | Canola | cytosol | 0.31 | 9.09 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078G0W0 | UniProt:A0A078G0W0 | EnsemblPlants:CDY19094 | ProteinID:CDY19094 |
| ProteinID:CDY19094.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00006370001 | InterPro:IPR004827 | PFAM:PF00170 | PFscan:PS50217 | PANTHER:PTHR13690 |
| PANTHER:PTHR13690:SF80 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EE8F71 | InterPro:bZIP | SEG:seg |
Description
BnaA04g18340DBnaA04g18340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G0W0]
Coordinates
chrLK032092:-:217152..219250
Molecular Weight (calculated)
35297.2 Da
IEP (calculated)
5.827
GRAVY (calculated)
-0.806
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKEKSPAPP CGGGGRLPPP SPSGRSSPFS DANRLSHDMS RMLEHPPKKI GHRRAHSEIL TLPDDLSFDF DLGVVGGSAD VPSFSDDTEG GDLMSMYLDM
101: DKFNSSTATS SAQVGEPSRT AWKNESVMPQ NSFGERPRVR HQHSHSMDGS LNISEMLVSG NEDDSVVDAK KSMSAAKLAE LALVDPKRAK RIWANRQSAA
201: RSKERKTRYI FELERKVQTL QTEATTLSAQ LTLLQRDANG LTVENNELKL RLQTMEQRVQ LQDELNEALK EEIHHLKALT GQVASNGASS AMNYDEKTEA
301: RPDGELRNNE YYVHFTDE
101: DKFNSSTATS SAQVGEPSRT AWKNESVMPQ NSFGERPRVR HQHSHSMDGS LNISEMLVSG NEDDSVVDAK KSMSAAKLAE LALVDPKRAK RIWANRQSAA
201: RSKERKTRYI FELERKVQTL QTEATTLSAQ LTLLQRDANG LTVENNELKL RLQTMEQRVQ LQDELNEALK EEIHHLKALT GQVASNGASS AMNYDEKTEA
301: RPDGELRNNE YYVHFTDE
001: MDKEKSPAPP CGGLPPPSPS GRCSAFSEAG PIGHGSDANR MSHDISRMLD NPPKKIGHRR AHSEILTLPD DLSFDSDLGV VGNAADGASF SDETEEDLLS
101: MYLDMDKFNS SATSSAQVGE PSGTAWKNET MMQTGTGSTS NPQNTVNSLG ERPRIRHQHS QSMDGSMNIN EMLMSGNEDD SAIDAKKSMS ATKLAELALI
201: DPKRAKRIWA NRQSAARSKE RKTRYIFELE RKVQTLQTEA TTLSAQLTLL QRDTNGLTVE NNELKLRLQT MEQQVHLQDE LNEALKEEIQ HLKVLTGQVA
301: PSALNYGSFG SNQQQFYSNN QSMQTILAAK QFQQLQIHSQ KQQQQQQQQQ QQHQQQQQQQ QQYQFQQQQM QQLMQQRLQQ QEQQNGVRLK PSQAQKEN
101: MYLDMDKFNS SATSSAQVGE PSGTAWKNET MMQTGTGSTS NPQNTVNSLG ERPRIRHQHS QSMDGSMNIN EMLMSGNEDD SAIDAKKSMS ATKLAELALI
201: DPKRAKRIWA NRQSAARSKE RKTRYIFELE RKVQTLQTEA TTLSAQLTLL QRDTNGLTVE NNELKLRLQT MEQQVHLQDE LNEALKEEIQ HLKVLTGQVA
301: PSALNYGSFG SNQQQFYSNN QSMQTILAAK QFQQLQIHSQ KQQQQQQQQQ QQHQQQQQQQ QQYQFQQQQM QQLMQQRLQQ QEQQNGVRLK PSQAQKEN
Arabidopsis Description
POSF21AT2G31370 protein [Source:UniProtKB/TrEMBL;Acc:B9DGB1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.