Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10799 | Canola | nucleus | 79.4 | 85.18 |
| CDY56611 | Canola | nucleus | 78.39 | 84.78 |
| Bra018250.1-P | Field mustard | nucleus | 78.89 | 83.96 |
| CDY15381 | Canola | nucleus | 76.38 | 82.16 |
| CDY19094 | Canola | nucleus | 63.82 | 79.87 |
| Bra021735.1-P | Field mustard | nucleus | 64.07 | 75.22 |
| AT1G06070.1 | Thale cress | nucleus | 73.12 | 68.79 |
| VIT_05s0102g01120.t01 | Wine grape | nucleus | 67.59 | 63.29 |
| Solyc06g053350.2.1 | Tomato | plastid | 64.32 | 58.99 |
| KRH29611 | Soybean | nucleus | 55.53 | 57.4 |
| GSMUA_Achr11P... | Banana | nucleus | 52.76 | 56.15 |
| Zm00001d021189_P001 | Maize | nucleus | 51.01 | 54.86 |
| KRH24606 | Soybean | nucleus | 54.52 | 54.66 |
| GSMUA_AchrUn_... | Banana | nucleus | 54.77 | 54.64 |
| GSMUA_Achr5P25700_001 | Banana | nucleus | 48.49 | 54.37 |
| TraesCS5A01G299400.1 | Wheat | nucleus | 51.26 | 54.11 |
| TraesCS5B01G301900.1 | Wheat | nucleus | 51.26 | 54.11 |
| EER99183 | Sorghum | nucleus | 53.27 | 54.08 |
| GSMUA_Achr11P... | Banana | nucleus | 60.8 | 54.02 |
| TraesCS5D01G308600.1 | Wheat | nucleus | 51.01 | 53.99 |
| Os09t0516200-01 | Rice | nucleus | 51.51 | 53.95 |
| Zm00001d006127_P003 | Maize | nucleus | 50.25 | 53.91 |
| HORVU7Hr1G056230.2 | Barley | nucleus | 45.23 | 49.32 |
| TraesCS7A01G266400.1 | Wheat | nucleus | 44.97 | 49.04 |
| TraesCS7B01G166100.1 | Wheat | nucleus | 44.72 | 48.11 |
| TraesCS7D01G268400.1 | Wheat | nucleus | 43.72 | 47.28 |
| TraesCS2A01G352100.1 | Wheat | nucleus | 43.72 | 46.65 |
| Zm00001d003180_P001 | Maize | nucleus | 42.71 | 46.07 |
| HORVU5Hr1G079160.11 | Barley | vacuole | 51.51 | 46.07 |
| EES12438 | Sorghum | nucleus | 43.72 | 46.03 |
| Zm00001d031697_P001 | Maize | nucleus | 28.64 | 45.78 |
| EES14151 | Sorghum | nucleus | 42.46 | 44.24 |
| HORVU2Hr1G085560.4 | Barley | nucleus, plastid | 42.71 | 44.04 |
| Zm00001d052717_P001 | Maize | nucleus | 40.7 | 42.3 |
| AT1G06850.1 | Thale cress | nucleus | 31.41 | 37.09 |
| AT2G40620.1 | Thale cress | nucleus | 33.42 | 36.24 |
| AT1G43700.1 | Thale cress | nucleus | 30.15 | 35.19 |
| AT2G21230.3 | Thale cress | nucleus | 32.16 | 24.38 |
| AT4G38900.1 | Thale cress | nucleus | 32.91 | 23.69 |
| AT2G13150.1 | Thale cress | plastid | 15.33 | 23.28 |
| AT2G12900.1 | Thale cress | plastid | 15.33 | 23.11 |
| AT3G58120.1 | Thale cress | nucleus | 18.34 | 22.19 |
| AT2G42380.2 | Thale cress | nucleus, plastid | 17.59 | 21.81 |
| AT2G12940.1 | Thale cress | plastid | 15.83 | 21.43 |
| AT1G58110.2 | Thale cress | nucleus | 18.34 | 19.52 |
| AT1G35490.1 | Thale cress | nucleus | 13.57 | 18.0 |
| AT4G06598.1 | Thale cress | nucleus | 11.31 | 16.98 |
| AT5G04840.1 | Thale cress | plastid | 12.31 | 15.96 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:817695 | UniProt:A0A178W306 | ProteinID:AAD26486.1 | ProteinID:AEC08534.1 |
| ProteinID:AEC08535.1 | ProteinID:AEC08536.1 | ProteinID:AEC08537.1 | ProteinID:AEC08539.1 | EMBL:AK317087 | ProteinID:ANM62710.1 |
| ArrayExpress:AT2G31370 | EnsemblPlantsGene:AT2G31370 | RefSeq:AT2G31370 | TAIR:AT2G31370 | RefSeq:AT2G31370-TAIR-G | EnsemblPlants:AT2G31370.6 |
| TAIR:AT2G31370.6 | EMBL:AY057534 | EMBL:AY113058 | UniProt:B9DGB1 | ProteinID:CAA43366.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR004827 | RefSeq:NP_001031456.2 | RefSeq:NP_001189650.1 | RefSeq:NP_001318327.1 | RefSeq:NP_180695.1 | RefSeq:NP_850167.1 |
| RefSeq:NP_850168.2 | ProteinID:OAP11723.1 | PFAM:PF00170 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50217 | PANTHER:PTHR13690 | PANTHER:PTHR13690:SF80 |
| UniProt:Q04088 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0000000E34 | InterPro:bZIP | SEG:seg |
Description
POSF21AT2G31370 protein [Source:UniProtKB/TrEMBL;Acc:B9DGB1]
Coordinates
chr2:+:13378929..13381761
Molecular Weight (calculated)
44692.2 Da
IEP (calculated)
6.520
GRAVY (calculated)
-0.996
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKEKSPAPP CGGLPPPSPS GRCSAFSEAG PIGHGSDANR MSHDISRMLD NPPKKIGHRR AHSEILTLPD DLSFDSDLGV VGNAADGASF SDETEEDLLS
101: MYLDMDKFNS SATSSAQVGE PSGTAWKNET MMQTGTGSTS NPQNTVNSLG ERPRIRHQHS QSMDGSMNIN EMLMSGNEDD SAIDAKKSMS ATKLAELALI
201: DPKRAKRIWA NRQSAARSKE RKTRYIFELE RKVQTLQTEA TTLSAQLTLL QRDTNGLTVE NNELKLRLQT MEQQVHLQDE LNEALKEEIQ HLKVLTGQVA
301: PSALNYGSFG SNQQQFYSNN QSMQTILAAK QFQQLQIHSQ KQQQQQQQQQ QQHQQQQQQQ QQYQFQQQQM QQLMQQRLQQ QEQQNGVRLK PSQAQKEN
101: MYLDMDKFNS SATSSAQVGE PSGTAWKNET MMQTGTGSTS NPQNTVNSLG ERPRIRHQHS QSMDGSMNIN EMLMSGNEDD SAIDAKKSMS ATKLAELALI
201: DPKRAKRIWA NRQSAARSKE RKTRYIFELE RKVQTLQTEA TTLSAQLTLL QRDTNGLTVE NNELKLRLQT MEQQVHLQDE LNEALKEEIQ HLKVLTGQVA
301: PSALNYGSFG SNQQQFYSNN QSMQTILAAK QFQQLQIHSQ KQQQQQQQQQ QQHQQQQQQQ QQYQFQQQQM QQLMQQRLQQ QEQQNGVRLK PSQAQKEN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.