Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018250.1-P | Field mustard | nucleus | 98.92 | 98.13 |
| CDY56611 | Canola | nucleus | 95.42 | 96.2 |
| CDY15381 | Canola | nucleus | 80.86 | 81.08 |
| CDY19094 | Canola | nucleus | 68.19 | 79.56 |
| AT2G31370.6 | Thale cress | nucleus | 85.18 | 79.4 |
| CDY15560 | Canola | nucleus | 68.19 | 66.4 |
| CDX86537 | Canola | nucleus | 70.08 | 66.16 |
| CDY47713 | Canola | nucleus | 69.81 | 66.07 |
| CDY10170 | Canola | nucleus | 69.54 | 65.65 |
| VIT_05s0102g01120.t01 | Wine grape | nucleus | 67.12 | 58.59 |
| Solyc06g053350.2.1 | Tomato | plastid | 66.31 | 56.68 |
| KRH29611 | Soybean | nucleus | 57.68 | 55.58 |
| KRH24606 | Soybean | nucleus | 58.76 | 54.91 |
| GSMUA_Achr11P... | Banana | nucleus | 54.45 | 54.01 |
| TraesCS5D01G308600.1 | Wheat | nucleus | 53.37 | 52.66 |
| Os09t0516200-01 | Rice | nucleus | 53.91 | 52.63 |
| Zm00001d021189_P001 | Maize | nucleus | 52.29 | 52.43 |
| TraesCS5B01G301900.1 | Wheat | nucleus | 53.1 | 52.25 |
| TraesCS5A01G299400.1 | Wheat | nucleus | 53.1 | 52.25 |
| EER99183 | Sorghum | nucleus | 54.45 | 51.53 |
| Zm00001d006127_P003 | Maize | nucleus | 51.48 | 51.48 |
| GSMUA_Achr5P25700_001 | Banana | nucleus | 48.79 | 50.99 |
| GSMUA_AchrUn_... | Banana | nucleus | 54.72 | 50.88 |
| GSMUA_Achr11P... | Banana | nucleus | 59.57 | 49.33 |
| HORVU7Hr1G056230.2 | Barley | nucleus | 47.17 | 47.95 |
| TraesCS7A01G266400.1 | Wheat | nucleus | 46.63 | 47.4 |
| TraesCS7B01G166100.1 | Wheat | nucleus | 46.36 | 46.49 |
| TraesCS2A01G352100.1 | Wheat | nucleus | 46.63 | 46.38 |
| TraesCS7D01G268400.1 | Wheat | nucleus | 45.28 | 45.65 |
| Zm00001d003180_P001 | Maize | nucleus | 44.74 | 44.99 |
| HORVU5Hr1G079160.11 | Barley | vacuole | 53.64 | 44.72 |
| EES12438 | Sorghum | nucleus | 45.55 | 44.71 |
| Zm00001d031697_P001 | Maize | nucleus | 29.65 | 44.18 |
| HORVU2Hr1G085560.4 | Barley | nucleus, plastid | 45.82 | 44.04 |
| EES14151 | Sorghum | nucleus | 44.74 | 43.46 |
| Zm00001d052717_P001 | Maize | nucleus | 43.94 | 42.56 |
| CDY48943 | Canola | nucleus | 26.68 | 41.08 |
| CDY35020 | Canola | nucleus | 19.41 | 40.91 |
| CDX86512 | Canola | nucleus | 33.96 | 39.62 |
| CDY15590 | Canola | nucleus | 34.23 | 39.56 |
| CDY06231 | Canola | nucleus | 33.96 | 38.77 |
| CDY09952 | Canola | nucleus | 33.96 | 38.41 |
| CDX93167 | Canola | nucleus | 34.23 | 37.03 |
| CDY06974 | Canola | nucleus | 35.04 | 36.93 |
| CDX80722 | Canola | nucleus | 31.54 | 36.34 |
| CDY23889 | Canola | nucleus | 33.69 | 35.21 |
| CDX79976 | Canola | nucleus | 33.42 | 34.83 |
| CDY30752 | Canola | nucleus | 30.19 | 33.94 |
| CDY71925 | Canola | nucleus | 23.18 | 33.86 |
| CDY24896 | Canola | nucleus | 29.38 | 32.15 |
| CDY13830 | Canola | nucleus, plastid | 26.15 | 31.6 |
| CDY07597 | Canola | nucleus | 27.49 | 30.54 |
| CDX82008 | Canola | nucleus | 27.76 | 27.69 |
| CDY15909 | Canola | plastid | 32.61 | 27.25 |
| CDX72732 | Canola | nucleus | 31.81 | 26.76 |
| CDX99610 | Canola | nucleus | 31.81 | 26.7 |
| CDY22407 | Canola | nucleus | 31.27 | 26.07 |
| CDY12108 | Canola | nucleus | 29.38 | 25.59 |
| CDY56238 | Canola | extracellular | 9.16 | 25.37 |
| CDX90298 | Canola | nucleus | 29.92 | 25.34 |
| CDY64520 | Canola | nucleus, plastid | 18.6 | 25.27 |
| CDX71974 | Canola | nucleus, plastid | 18.06 | 25.09 |
| CDX71000 | Canola | nucleus, plastid | 18.87 | 25.09 |
| CDY06053 | Canola | nucleus | 19.14 | 25.0 |
| CDY22561 | Canola | nucleus, plastid | 18.06 | 25.0 |
| CDX79872 | Canola | nucleus, plastid | 18.87 | 25.0 |
| CDY35379 | Canola | nucleus, plastid | 17.79 | 24.63 |
| CDX98266 | Canola | nucleus, plastid | 18.6 | 23.15 |
| CDY46864 | Canola | nucleus | 17.79 | 19.76 |
| CDY23807 | Canola | nucleus | 17.79 | 19.64 |
| CDX82009 | Canola | plastid | 19.14 | 18.54 |
| CDY70502 | Canola | nucleus | 19.14 | 18.39 |
| CDY39913 | Canola | nucleus | 18.06 | 18.06 |
| CDY29162 | Canola | nucleus | 18.06 | 17.91 |
| CDY13828 | Canola | plastid | 18.6 | 17.83 |
| CDY48939 | Canola | nucleus | 14.56 | 17.48 |
| CDX80717 | Canola | nucleus, plastid | 14.56 | 16.88 |
| CDX70198 | Canola | mitochondrion, nucleus | 12.13 | 14.66 |
| CDY44883 | Canola | mitochondrion, nucleus | 11.86 | 14.38 |
| CDY13829 | Canola | cytosol | 0.27 | 9.09 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078FCZ6 | UniProt:A0A078FCZ6 | EnsemblPlants:CDY10799 | ProteinID:CDY10799 |
| ProteinID:CDY10799.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00048644001 | InterPro:IPR004827 | PFAM:PF00170 | PFscan:PS50217 | PANTHER:PTHR13690 |
| PANTHER:PTHR13690:SF80 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EF2013 | InterPro:bZIP | SEG:seg |
Description
BnaA05g11370DBnaA05g11370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCZ6]
Coordinates
chrLK032006:+:813453..815518
Molecular Weight (calculated)
41623.5 Da
IEP (calculated)
6.637
GRAVY (calculated)
-0.925
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MEREKSPAPS GGLPPPSPTP INHSSDANRL SHDMSRMLEH PPKKIGHRRA HSEILTLPDD LSFDSDLGVV GTNAADGASF SDDTEEDLLS MYLDMDKFNS
101: STATSSAAAQ VGEPSWRNES VGMHTGLTSN PPRVRHQHSH SMDGSLNISE MLVSGEGDDS VVDAKKSMSA AKLAELALID PKRAKRIWAN RQSAARSKER
201: KTRYIFELER KVQTLQTEAT TLSAQLTLLQ RDTNGLTVEN NELKLRLQTM EQQVHLQDEL NEALKEEIQH LKVLTGQAAS NGASAVNYGS FGQQQQQQFY
301: SNNQSMQTIL AAQQLQQLQL HSQKQQQHQQ QQQQQQFQFQ QQQIQQLMQH RLRQQEQQNG KQKPFNGQNE S
101: STATSSAAAQ VGEPSWRNES VGMHTGLTSN PPRVRHQHSH SMDGSLNISE MLVSGEGDDS VVDAKKSMSA AKLAELALID PKRAKRIWAN RQSAARSKER
201: KTRYIFELER KVQTLQTEAT TLSAQLTLLQ RDTNGLTVEN NELKLRLQTM EQQVHLQDEL NEALKEEIQH LKVLTGQAAS NGASAVNYGS FGQQQQQQFY
301: SNNQSMQTIL AAQQLQQLQL HSQKQQQHQQ QQQQQQFQFQ QQQIQQLMQH RLRQQEQQNG KQKPFNGQNE S
001: MDKEKSPAPP CGGLPPPSPS GRCSAFSEAG PIGHGSDANR MSHDISRMLD NPPKKIGHRR AHSEILTLPD DLSFDSDLGV VGNAADGASF SDETEEDLLS
101: MYLDMDKFNS SATSSAQVGE PSGTAWKNET MMQTGTGSTS NPQNTVNSLG ERPRIRHQHS QSMDGSMNIN EMLMSGNEDD SAIDAKKSMS ATKLAELALI
201: DPKRAKRIWA NRQSAARSKE RKTRYIFELE RKVQTLQTEA TTLSAQLTLL QRDTNGLTVE NNELKLRLQT MEQQVHLQDE LNEALKEEIQ HLKVLTGQVA
301: PSALNYGSFG SNQQQFYSNN QSMQTILAAK QFQQLQIHSQ KQQQQQQQQQ QQHQQQQQQQ QQYQFQQQQM QQLMQQRLQQ QEQQNGVRLK PSQAQKEN
101: MYLDMDKFNS SATSSAQVGE PSGTAWKNET MMQTGTGSTS NPQNTVNSLG ERPRIRHQHS QSMDGSMNIN EMLMSGNEDD SAIDAKKSMS ATKLAELALI
201: DPKRAKRIWA NRQSAARSKE RKTRYIFELE RKVQTLQTEA TTLSAQLTLL QRDTNGLTVE NNELKLRLQT MEQQVHLQDE LNEALKEEIQ HLKVLTGQVA
301: PSALNYGSFG SNQQQFYSNN QSMQTILAAK QFQQLQIHSQ KQQQQQQQQQ QQHQQQQQQQ QQYQFQQQQM QQLMQQRLQQ QEQQNGVRLK PSQAQKEN
Arabidopsis Description
POSF21AT2G31370 protein [Source:UniProtKB/TrEMBL;Acc:B9DGB1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.