Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G268400.1 | Wheat | nucleus | 97.53 | 96.74 |
| TraesCS7B01G166100.1 | Wheat | nucleus | 96.99 | 95.68 |
| HORVU7Hr1G056230.2 | Barley | nucleus | 95.07 | 95.07 |
| EES14151 | Sorghum | nucleus | 58.63 | 56.02 |
| Zm00001d031697_P001 | Maize | nucleus | 38.08 | 55.82 |
| Zm00001d052717_P001 | Maize | nucleus | 57.81 | 55.09 |
| TraesCS5A01G299400.1 | Wheat | nucleus | 55.89 | 54.11 |
| CDY19094 | Canola | nucleus | 42.19 | 48.43 |
| GSMUA_Achr5P25700_001 | Banana | nucleus | 46.85 | 48.17 |
| CDY10170 | Canola | nucleus | 51.23 | 47.58 |
| CDY56611 | Canola | nucleus | 47.95 | 47.55 |
| Bra030637.1-P | Field mustard | nucleus | 49.04 | 46.98 |
| CDY47713 | Canola | nucleus | 50.41 | 46.94 |
| Bra015471.1-P | Field mustard | nucleus | 50.41 | 46.94 |
| CDY10799 | Canola | nucleus | 47.4 | 46.63 |
| Bra018250.1-P | Field mustard | nucleus | 47.67 | 46.52 |
| CDY15560 | Canola | nucleus | 48.22 | 46.19 |
| GSMUA_Achr11P... | Banana | nucleus | 47.12 | 45.99 |
| CDY15381 | Canola | nucleus | 46.3 | 45.68 |
| Bra021735.1-P | Field mustard | nucleus | 42.19 | 45.43 |
| CDX86537 | Canola | nucleus | 48.77 | 45.29 |
| AT2G31370.6 | Thale cress | nucleus | 49.04 | 44.97 |
| AT1G06070.1 | Thale cress | nucleus | 51.78 | 44.68 |
| KRH10117 | Soybean | nucleus | 50.96 | 44.29 |
| VIT_05s0102g01120.t01 | Wine grape | nucleus | 51.51 | 44.24 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.22 | 44.11 |
| Solyc06g053350.2.1 | Tomato | plastid | 52.33 | 44.01 |
| KRH23219 | Soybean | nucleus | 51.51 | 43.93 |
| TraesCS2A01G352100.1 | Wheat | nucleus | 44.38 | 43.43 |
| GSMUA_Achr11P... | Banana | nucleus | 51.78 | 42.19 |
| KRH29611 | Soybean | nucleus | 44.38 | 42.08 |
| KRH24606 | Soybean | nucleus | 44.11 | 40.55 |
| TraesCS4A01G209900.1 | Wheat | nucleus | 33.15 | 36.56 |
| TraesCS4A01G135600.2 | Wheat | nucleus | 35.62 | 36.52 |
| TraesCS5A01G124600.1 | Wheat | nucleus | 33.15 | 36.45 |
| TraesCS5A01G491600.1 | Wheat | nucleus | 24.93 | 35.55 |
| TraesCS2A01G105700.1 | Wheat | nucleus, plastid | 34.79 | 34.51 |
| TraesCS1A01G186000.1 | Wheat | plastid | 30.41 | 28.39 |
| TraesCS5A01G143300.1 | Wheat | nucleus | 18.08 | 27.62 |
| TraesCS7A01G268700.1 | Wheat | nucleus | 33.42 | 26.12 |
| TraesCS2A01G140900.1 | Wheat | nucleus | 19.73 | 23.53 |
| TraesCS3A01G293700.2 | Wheat | nucleus | 18.9 | 23.15 |
| TraesCS3A01G131900.1 | Wheat | nucleus | 17.81 | 20.44 |
| TraesCS5A01G308400.1 | Wheat | nucleus | 24.66 | 17.65 |
| TraesCS4A01G204300.1 | Wheat | nucleus | 16.71 | 17.63 |
| TraesCS6A01G203200.1 | Wheat | nucleus | 13.15 | 14.86 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G266400.1 | EnsemblPlantsGene:TraesCS7A01G266400 | Gene3D:1.20.5.170 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| InterPro:bZIP | ncoils:Coil | PANTHER:PTHR13690 | PANTHER:PTHR13690:SF80 | PFAM:PF00170 | PFscan:PS50217 |
| SEG:seg | SMART:SM00338 | SUPFAM:SSF57959 | TIGR:cd14703 | MapMan:15.5.4.1 | : |
Description
No Description!
Coordinates
chr7A:+:268862359..268865005
Molecular Weight (calculated)
39386.6 Da
IEP (calculated)
7.005
GRAVY (calculated)
-0.633
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRSPAPDGG GGNRLPPVKP SVSLSPSPTG PPESDISHMP DSPARSLGHR RAHSEIIGLP DDLDLGVPGC AGDGPSLSDE NEEEFFSMFL DAEKLNAQLR
101: EASETESSCA SAGAGAGPRP RHHHSHSMDA SSSFDAEQLL GAPSVEGMST VEAKKAMSNA KLAELALVDP KKAKRIWANR QSAARSKERK MRYISELERK
201: VQTLHAEATT LSTQLALLHR DTAGLSTENS ELKMRLQNVE QQIHLQDALN DALKSELQRL KMATSHMGNT VGGMMNLIGP PPPHSFGGNQ PMFHIQGQAA
301: MQPLHQMQQI HPQHQQPLLH PLQLQAQQLL LQQQASAAPP PNPKMKRAIS APNQWIGGWS ESSGN
101: EASETESSCA SAGAGAGPRP RHHHSHSMDA SSSFDAEQLL GAPSVEGMST VEAKKAMSNA KLAELALVDP KKAKRIWANR QSAARSKERK MRYISELERK
201: VQTLHAEATT LSTQLALLHR DTAGLSTENS ELKMRLQNVE QQIHLQDALN DALKSELQRL KMATSHMGNT VGGMMNLIGP PPPHSFGGNQ PMFHIQGQAA
301: MQPLHQMQQI HPQHQQPLLH PLQLQAQQLL LQQQASAAPP PNPKMKRAIS APNQWIGGWS ESSGN
001: MDKEKSPAPP PSGGLPPPSG RYSAFSPNGS SFAMKAESSF PPLTPSGSNS SDANRFSHDI SRMPDNPPKN LGHRRAHSEI LTLPDDLSFD SDLGVVGAAD
101: GPSFSDDTDE DLLYMYLDME KFNSSATSTS QMGEPSEPTW RNELASTSNL QSTPGSSSER PRIRHQHSQS MDGSTTIKPE MLMSGNEDVS GVDSKKAISA
201: AKLSELALID PKRAKRIWAN RQSAARSKER KMRYIAELER KVQTLQTEAT SLSAQLTLLQ RDTNGLGVEN NELKLRVQTM EQQVHLQDAL NDALKEEVQH
301: LKVLTGQGPS NGTSMNYGSF GSNQQFYPNN QSMHTILAAQ QLQQLQIQSQ KQQQQQQQHQ QQQQQQQQQF HFQQQQLYQL QQQQRLQQQE QQSGASELRR
401: PMPSPGQKES VTSPDRETPL TKD
101: GPSFSDDTDE DLLYMYLDME KFNSSATSTS QMGEPSEPTW RNELASTSNL QSTPGSSSER PRIRHQHSQS MDGSTTIKPE MLMSGNEDVS GVDSKKAISA
201: AKLSELALID PKRAKRIWAN RQSAARSKER KMRYIAELER KVQTLQTEAT SLSAQLTLLQ RDTNGLGVEN NELKLRVQTM EQQVHLQDAL NDALKEEVQH
301: LKVLTGQGPS NGTSMNYGSF GSNQQFYPNN QSMHTILAAQ QLQQLQIQSQ KQQQQQQQHQ QQQQQQQQQF HFQQQQLYQL QQQQRLQQQE QQSGASELRR
401: PMPSPGQKES VTSPDRETPL TKD
Arabidopsis Description
At1g06070 [Source:UniProtKB/TrEMBL;Acc:Q9LNE0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.