Factsheet for TraesCS5A01G308400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G315400.1	Wheat	plastid	88.04	96.15
TraesCS5B01G308800.1	Wheat	plastid	85.29	93.15
HORVU5Hr1G080140.1	Barley	nucleus, plastid	78.24	86.55
Zm00001d021191_P001	Maize	plastid	38.43	42.98
Zm00001d006157_P001	Maize	nucleus	39.61	42.17
EER97061	Sorghum	nucleus	39.41	40.2
Os04t0181300-00	Rice	nucleus	32.94	39.44
TraesCS7A01G268700.1	Wheat	nucleus	33.92	37.05
TraesCS5A01G491600.1	Wheat	nucleus	18.43	36.72
TraesCS1A01G186000.1	Wheat	plastid	23.53	30.69
AT2G13150.1	Thale cress	plastid	14.31	27.86
TraesCS5A01G124600.1	Wheat	nucleus	16.86	25.9
TraesCS4A01G209900.1	Wheat	nucleus	16.67	25.68
AT2G12900.1	Thale cress	plastid	13.14	25.38
TraesCS4A01G135600.2	Wheat	nucleus	17.65	25.28
TraesCS2A01G105700.1	Wheat	nucleus, plastid	18.24	25.27
TraesCS7A01G266400.1	Wheat	nucleus	17.65	24.66
AT2G12940.1	Thale cress	plastid	14.12	24.49
TraesCS2A01G352100.1	Wheat	nucleus	17.84	24.4
TraesCS5A01G143300.1	Wheat	nucleus	11.37	24.27
TraesCS5A01G299400.1	Wheat	nucleus	17.84	24.14
Os09t0520400-01	Rice	nucleus	20.59	23.54
TraesCS2A01G140900.1	Wheat	nucleus	13.33	22.22
TraesCS3A01G293700.2	Wheat	nucleus	12.35	21.14
CDX82009	Canola	plastid	14.71	19.58
CDY70502	Canola	nucleus	14.71	19.43
CDY13828	Canola	plastid	14.51	19.12
Bra031173.1-P	Field mustard	plastid	14.51	19.12
TraesCS3A01G131900.1	Wheat	nucleus	11.37	18.24
TraesCS4A01G204300.1	Wheat	nucleus	11.76	17.34
TraesCS6A01G203200.1	Wheat	nucleus	9.61	15.17

Protein Annotations

EnsemblPlants:TraesCS5A01G308400.1	EnsemblPlantsGene:TraesCS5A01G308400	Gene3D:1.20.5.170	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
InterPro:bZIP	ncoils:Coil	PANTHER:PTHR13690	PANTHER:PTHR13690:SF76	PFAM:PF00170	PFscan:PS50217
SEG:seg	SMART:SM00338	SUPFAM:SSF57959	TIGR:cd14703	MapMan:15.5.4.1	:

Description

No Description!

Coordinates

chr5A:+:521004335..521007140

Molecular Weight (calculated)

54363.4 Da

IEP (calculated)

10.809

GRAVY (calculated)

-0.609

Length

510 amino acids

Sequence
(BLAST)

001: MDDNSAHRRH LLPLPGPHGR PRAPPPRPPA AGPTWTPTTR QSMRVRPLIP SPPTSHPAAA DLSSSIHRLQ PSLRLPPAHP ASVAARFVPG FGYYRVPPPP
101: PPPLPPAASG GAGSHHSRSL SQPQFFSMDF LFRPPYPDPS APSAIALSPP PPSGSDRGAS GLPPPSGSER GASRLPPLRA GHQRSQSDVL LAFSSQQNLP
201: MPPPAPVNAE ALVAANNSTL DGILGAYNKS TNGLGAVGSS GPVGQEQRDQ LDSQAPAWSP GDSSENEAES ADGSLPRHCR SLSADSLVGK FKFGPSGLEP
301: SNSNSNSNPP PPSPGPGPGA AARLARSGSG SIGGAAALFA KEFANSKEFS EAEKKVIMDS EHLAQIVLTD PKRVRRILNN RLSAAKSKER KAKYIVELEG
401: KVQVLQGETM NLSAQVKMVK KGQARLSIHN HEMRIRLQAL EEQAQLKKAL NEALHAEVER LNLVVAEASN PHMPNSSEQR MSSQMIQLHQ LQILRQPSQL
501: QQGQQRQRNF

Best Arabidopsis Sequence Match ( AT4G38900.1 )
(BLAST)

001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: NDPLFRILAN RQSAARSKER KMRYIVELEH KVQTLQTEAT TLSAQLTLLQ RDMMGLTNQN NELKFRLQAM EQQARLRDAL NEALNGEVQR LKLAIGESSQ
501: NESERSKMQS LNAEMFQQLN ISQLRQQPQQ MQQQSHQQNH QNGTMATKSE SNE

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.