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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 3
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G315400.1 Wheat plastid 87.2 86.08
TraesCS5B01G308800.1 Wheat plastid 85.68 84.58
TraesCS5A01G308400.1 Wheat nucleus 86.55 78.24
HORVU3Hr1G109890.1 Barley cytosol 6.07 45.16
Zm00001d021191_P001 Maize plastid 42.52 42.98
Zm00001d006157_P001 Maize nucleus 42.3 40.71
EER97061 Sorghum nucleus 42.08 38.8
Os04t0181300-00 Rice nucleus 34.06 36.85
HORVU7Hr1G056490.1 Barley nucleus, plastid 36.44 32.56
HORVU4Hr1G053410.2 Barley cytosol 24.08 29.21
HORVU4Hr1G083000.1 Barley nucleus 24.3 28.72
AT2G13150.1 Thale cress plastid 15.18 26.72
HORVU4Hr1G020540.1 Barley nucleus 18.0 25.7
HORVU4Hr1G050190.1 Barley nucleus 19.31 25.07
AT2G12940.1 Thale cress plastid 15.62 24.49
HORVU7Hr1G056230.2 Barley nucleus 19.31 24.38
HORVU3Hr1G072770.1 Barley nucleus 13.88 24.06
HORVU2Hr1G085560.4 Barley nucleus, plastid 19.96 23.83
HORVU5Hr1G045690.1 Barley nucleus 12.36 23.75
Os09t0520400-01 Rice nucleus 22.56 23.32
HORVU5Hr1G039870.5 Barley nucleus, plastid 18.0 23.25
AT2G12900.1 Thale cress plastid 13.23 23.11
HORVU2Hr1G017820.1 Barley nucleus 16.7 21.04
HORVU5Hr1G079160.11 Barley vacuole 18.87 19.55
CDY13828 Canola plastid 16.27 19.38
Bra031173.1-P Field mustard plastid 16.27 19.38
CDX82009 Canola plastid 16.05 19.32
CDY70502 Canola nucleus 16.05 19.17
HORVU3Hr1G040920.8 Barley nucleus 12.36 18.21
HORVU5Hr1G031130.2 Barley mitochondrion 12.58 16.11
HORVU1Hr1G049310.2 Barley nucleus 14.75 15.85
HORVU6Hr1G051110.4 Barley nucleus 10.41 14.91
HORVU4Hr1G016340.4 Barley nucleus, plastid 13.02 14.56
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1UniProt:A0A287RYM6ncoils:CoilGO:GO:0003674GO:GO:0003700
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
EnsemblPlantsGene:HORVU5Hr1G080140EnsemblPlants:HORVU5Hr1G080140.1InterPro:IPR004827PFAM:PF00170PFscan:PS50217PANTHER:PTHR13690
PANTHER:PTHR13690:SF76SMART:SM00338SUPFAM:SSF57959UniParc:UPI000B46BCE7InterPro:bZIPSEG:seg
Description
No Description!
Coordinates
chrchr5H:+:559133233..559135982
Molecular Weight (calculated)
48899.8 Da
IEP (calculated)
10.191
GRAVY (calculated)
-0.490
Length
461 amino acids
Sequence
(BLAST)
001: PIIPSPPTSH PVAADLSSSS SLRRLPPSLR LPPAHPASVA SRFVPCFGYS LAPPPAPFPA AASGGSGSHH PRSLSQPQFL SMDFLFRASY PDLAAPSAIA
101: LSSPPPPPLS SGSDRGPSGL PPPSGSDRMA SGLPPLRAGH LRSQSDVLQG FSYQPNLPPP APVNAEALVA ANNSTLDGIL GAYMSTNGLG AVGSSGAVGQ
201: ERRDQLDSQA PAWSPGDSSE NEAESANGSL PRHCRSLSAD SLVGKFKFGP SGLEPSNSDS NLPPPSPGTA AASRLARSGS GSIGGAAALF AKEFANTKEF
301: SEADKKVIMD SEHLAQIVLT DPKRVRRILN NRQSAAKSKE RKARYIVELE GKVQVLQGET MNLSAQVKMV KKGQTRLSIH NHEMRIRMQA LEEQAQLKNA
401: LNEALNAEVE RLKQLVAEAS NHHMPNGSEQ GMSSRMIQLH QLQIQRQPSQ LQQGQQRQRN F
Best Arabidopsis Sequence Match ( AT4G38900.1 )
(BLAST)
001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: NDPLFRILAN RQSAARSKER KMRYIVELEH KVQTLQTEAT TLSAQLTLLQ RDMMGLTNQN NELKFRLQAM EQQARLRDAL NEALNGEVQR LKLAIGESSQ
501: NESERSKMQS LNAEMFQQLN ISQLRQQPQQ MQQQSHQQNH QNGTMATKSE SNE
Arabidopsis Description
Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.