Factsheet for HORVU4Hr1G050190.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G169600.1	Wheat	nucleus	98.03	97.75
TraesCS4A01G135600.2	Wheat	nucleus	98.03	97.75
TraesCS4D01G171700.2	Wheat	nucleus	98.03	97.75
Os03t0336200-02	Rice	nucleus	78.31	84.5
OQU92641	Sorghum	nucleus	80.28	81.66
Zm00001d029064_P001	Maize	nucleus	78.31	80.35
Zm00001d047519_P001	Maize	nucleus	79.44	79.89
GSMUA_Achr2P18830_001	Banana	nucleus	53.24	65.62
HORVU3Hr1G109890.1	Barley	cytosol	10.99	62.9
GSMUA_Achr6P32530_001	Banana	nucleus	50.7	56.43
HORVU2Hr1G017820.1	Barley	nucleus	50.14	48.63
Bra000195.1-P	Field mustard	nucleus	40.56	43.11
HORVU4Hr1G020540.1	Barley	nucleus	34.37	37.77
HORVU7Hr1G056230.2	Barley	nucleus	36.9	35.89
HORVU5Hr1G039870.5	Barley	nucleus, plastid	33.52	33.33
HORVU2Hr1G085560.4	Barley	nucleus, plastid	34.65	31.87
HORVU4Hr1G083000.1	Barley	nucleus	33.24	30.26
HORVU5Hr1G079160.11	Barley	vacuole	37.75	30.11
HORVU3Hr1G072770.1	Barley	nucleus	20.85	27.82
HORVU4Hr1G053410.2	Barley	cytosol	29.58	27.63
HORVU5Hr1G045690.1	Barley	nucleus	18.59	27.5
CDY13830	Canola	nucleus, plastid	23.38	27.04
KRH35159	Soybean	nucleus	22.82	25.55
HORVU7Hr1G056490.1	Barley	nucleus, plastid	34.93	24.03
HORVU3Hr1G040920.8	Barley	nucleus	18.59	21.09
HORVU5Hr1G080140.1	Barley	nucleus, plastid	25.07	19.31
HORVU1Hr1G049310.2	Barley	nucleus	22.54	18.65
CDY13829	Canola	cytosol	0.56	18.18
HORVU5Hr1G031130.2	Barley	mitochondrion	17.18	16.94
HORVU6Hr1G051110.4	Barley	nucleus	14.08	15.53
HORVU4Hr1G016340.4	Barley	nucleus, plastid	16.34	14.08

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EMBL:AK369285	ncoils:Coil	UniProt:F2DZG5	GO:GO:0003674
GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:HORVU4Hr1G050190	EnsemblPlants:HORVU4Hr1G050190.1	InterPro:IPR004827	PFAM:PF00170	PFscan:PS50217
PANTHER:PTHR13690	PANTHER:PTHR13690:SF84	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000200765C	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DZG5]

Coordinates

chrchr4H:-:407812649..407816903

Molecular Weight (calculated)

38304.7 Da

IEP (calculated)

6.931

GRAVY (calculated)

-0.653

Length

355 amino acids

Sequence
(BLAST)

001: MQQPKPADPP ARPFPPPSPP MAAAAATAMR GAHHRRARSE VAFRLPDDLD IAGGADGDAS AGFDEIGSED DLFSTFMDIE KISSGPAAGS DRDRAAETSS
101: PPRPKHRYSS SVDGSGLFSA AGSAARRDAA AAQALADVLE AKKAMSPEQL AELAAIDPKR AKRILANRQS AARSKERKAR YMTELERKVQ TLQTEATTLS
201: AQLTLFQRDT TGLSSENAEL KIRLQAMEQQ AQLRDALNDA LKQEVERLKM ATGEMSNSSD AYSMGLQHVL YNSSFFPQSQ QNTAQHQGGA RFPPPFHPPH
301: PNVPNHQMLS HPNTLSDIMQ QDHLARLQGL DISKGHPVVK SESSSISASE SSSTF

Best Arabidopsis Sequence Match ( AT2G40620.1 )
(BLAST)

001: MEDPSNPQPN QSNLSQCPPL ATAPTPAPVR GPYHRRAHSE VQFRLPEDLD LSEPFGGFDE LGSEDDLFCS YMDIEKLGSG SGSASDSAGP SAPRSDNPFS
101: AENGGAEAGN SRPRHRHSLS VDGSSTLESI EAKKAMAPDK LAELWVVDPK RAKRIIANRQ SAARSKERKA RYILELERKV QTLQTEATTL SAQLSLFQRD
201: TTGLSSENTE LKLRLQVMEQ QAKLRDALNE QLKKEVERLK FATGEVSPAD AYNLGMAHMQ YQQQPQQSFF QHHHQQQTDA QNLQQMTHQF HLFQPNNNQN
301: QSSRTNPPTA HQLMHHATSN APAQSHSYSE AMHEDHLGRL QGLDISSCGR GSNFGRSDTV SESSSTM

Arabidopsis Description

BZIP18bZIP transcription factor 18 [Source:UniProtKB/Swiss-Prot;Acc:O22873]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.