Factsheet for Bra000195.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07597	Canola	nucleus	99.4	99.4
Bra016980.1-P	Field mustard	nucleus	71.26	69.59
Bra004582.1-P	Field mustard	nucleus	71.86	67.42
GSMUA_Achr6P32530_001	Banana	nucleus	40.72	42.63
Bra030663.1-P	Field mustard	nucleus	40.72	42.5
Os03t0336200-02	Rice	nucleus	41.62	42.25
Bra031541.1-P	Field mustard	nucleus	39.82	41.05
Zm00001d029064_P001	Maize	nucleus	42.52	41.04
OQU92641	Sorghum	nucleus	42.52	40.69
HORVU4Hr1G050190.1	Barley	nucleus	43.11	40.56
TraesCS4D01G171700.2	Wheat	nucleus	43.11	40.45
TraesCS4A01G135600.2	Wheat	nucleus	43.11	40.45
Zm00001d047519_P001	Maize	nucleus	42.52	40.23
TraesCS4B01G169600.1	Wheat	nucleus	42.81	40.17
GSMUA_Achr2P18830_001	Banana	nucleus	34.43	39.93
Zm00001d007172_P001	Maize	plastid	39.22	36.19
Zm00001d022442_P001	Maize	nucleus	40.42	36.1
TraesCS2B01G122700.1	Wheat	nucleus	39.82	35.95
TraesCS2D01G105400.1	Wheat	nucleus	39.52	35.87
TraesCS2A01G105700.1	Wheat	nucleus, plastid	39.52	35.87
OQU90478	Sorghum	nucleus	40.42	35.71
Bra021735.1-P	Field mustard	nucleus	30.54	30.09
Bra015471.1-P	Field mustard	nucleus	33.53	28.57
Bra018250.1-P	Field mustard	nucleus	31.14	27.81
Bra030637.1-P	Field mustard	nucleus	31.14	27.3
HORVU2Hr1G017820.1	Barley	nucleus	29.64	27.05
Bra034916.1-P	Field mustard	nucleus, plastid	21.26	27.0
Bra032191.1-P	Field mustard	nucleus	22.75	23.03
KRH35159	Soybean	nucleus	21.86	23.03
Bra035464.1-P	Field mustard	nucleus	11.98	22.73
Bra010722.1-P	Field mustard	nucleus	28.14	21.12
Bra033582.1-P	Field mustard	nucleus	26.95	20.18
Bra031172.1-P	Field mustard	nucleus	22.46	19.95
Bra030314.1-P	Field mustard	plastid	26.65	19.35
Bra004689.1-P	Field mustard	nucleus, plastid	17.07	18.63
Bra003320.1-P	Field mustard	nucleus	14.97	16.45
Bra034913.1-P	Field mustard	nucleus	10.78	16.22
Bra007380.1-P	Field mustard	nucleus	15.27	16.04
Bra031173.1-P	Field mustard	plastid	18.26	15.76
Bra000256.1-P	Field mustard	nucleus, plastid	16.17	14.92
Bra027885.1-P	Field mustard	nucleus	16.47	14.75
Bra009426.1-P	Field mustard	mitochondrion, nucleus	10.48	11.4

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra000195	EnsemblPlants:Bra000195.1	EnsemblPlants:Bra000195.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
UniProt:M4C7L7	PFAM:PF00170	PFscan:PS50217	PANTHER:PTHR13690	PANTHER:PTHR13690:SF103	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI00025402D9	InterPro:bZIP	SEG:seg	:	:

Description

AT2G40620 (E=3e-085) | bZIP transcription factor family protein

Coordinates

chrA03:-:9815559..9817501

Molecular Weight (calculated)

37384.2 Da

IEP (calculated)

6.396

GRAVY (calculated)

-1.001

Length

334 amino acids

Sequence
(BLAST)

001: MDHDPSNAKP NQHPPLTNPS PTSFRGPNHR RAHSEDQFRL PEDLDFSETF SGFYDLGSED DLFCSYMDVE NLGSGLGPGN DNPFPAENGG GGGREEEGGR
101: ERPRHRHSVS VDGSSSLESI EARKAMTPEQ LAELWVVDPK RAKRIMSNRQ SAARSKERKT RYIMQLEKRV QALQAEYATR SAYLSLINGD IDGLLSENTK
201: LKLQIQMVEQ KAKLHDALND KMKRESEMMR FAAAGQVSHS DAYNLQMARM QYSQQQAFFQ QQADAQNMQQ MTPQFHHFQP NNNQNPPLMH HATSNASGQS
301: HSYAEEDHLG SLQGLDIGNG SNFGRSSESS SSTK

Best Arabidopsis Sequence Match ( AT2G40620.1 )
(BLAST)

001: MEDPSNPQPN QSNLSQCPPL ATAPTPAPVR GPYHRRAHSE VQFRLPEDLD LSEPFGGFDE LGSEDDLFCS YMDIEKLGSG SGSASDSAGP SAPRSDNPFS
101: AENGGAEAGN SRPRHRHSLS VDGSSTLESI EAKKAMAPDK LAELWVVDPK RAKRIIANRQ SAARSKERKA RYILELERKV QTLQTEATTL SAQLSLFQRD
201: TTGLSSENTE LKLRLQVMEQ QAKLRDALNE QLKKEVERLK FATGEVSPAD AYNLGMAHMQ YQQQPQQSFF QHHHQQQTDA QNLQQMTHQF HLFQPNNNQN
301: QSSRTNPPTA HQLMHHATSN APAQSHSYSE AMHEDHLGRL QGLDISSCGR GSNFGRSDTV SESSSTM

Arabidopsis Description

BZIP18bZIP transcription factor 18 [Source:UniProtKB/Swiss-Prot;Acc:O22873]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.