Factsheet for Bra033582.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22407	Canola	nucleus	98.65	98.88
Bra010722.1-P	Field mustard	nucleus	71.97	72.13
AT4G38900.1	Thale cress	nucleus	80.04	64.56
VIT_18s0001g13740.t01	Wine grape	nucleus	17.71	59.85
Bra030314.1-P	Field mustard	plastid	45.74	44.35
Bra031172.1-P	Field mustard	nucleus	33.18	39.36
KRH61066	Soybean	nucleus, plastid	43.05	37.43
Solyc04g081190.2.1	Tomato	nucleus	36.77	36.94
PGSC0003DMT400009538	Potato	nucleus	36.77	36.94
Bra034916.1-P	Field mustard	nucleus, plastid	21.52	36.5
KRH05913	Soybean	nucleus	43.27	34.9
KRH17396	Soybean	nucleus	42.15	33.63
Bra016980.1-P	Field mustard	nucleus	25.78	33.63
Bra030663.1-P	Field mustard	nucleus	23.99	33.44
Bra031541.1-P	Field mustard	nucleus	23.99	33.02
Bra030637.1-P	Field mustard	nucleus	28.03	32.81
Bra004582.1-P	Field mustard	nucleus	26.01	32.58
KRH51734	Soybean	nucleus	28.92	32.17
Bra021735.1-P	Field mustard	nucleus	23.99	31.56
Bra032191.1-P	Field mustard	nucleus	23.32	31.52
Bra018250.1-P	Field mustard	nucleus	25.78	30.75
Bra015471.1-P	Field mustard	nucleus	26.68	30.36
Bra000195.1-P	Field mustard	nucleus	20.18	26.95
Bra035464.1-P	Field mustard	nucleus	9.87	25.0
Bra004689.1-P	Field mustard	nucleus, plastid	15.7	22.88
Bra003320.1-P	Field mustard	nucleus	15.25	22.37
Bra031173.1-P	Field mustard	plastid	19.06	21.96
Bra007380.1-P	Field mustard	nucleus	15.25	21.38
Bra000256.1-P	Field mustard	nucleus, plastid	14.8	18.23
Bra027885.1-P	Field mustard	nucleus	14.57	17.43
Bra034913.1-P	Field mustard	nucleus	8.3	16.67
Bra009426.1-P	Field mustard	mitochondrion, nucleus	10.54	15.31

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra033582	EnsemblPlants:Bra033582.1	EnsemblPlants:Bra033582.1-P	ncoils:Coil
GO:GO:0000003	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009791	GO:GO:0009987	GO:GO:0090567
InterPro:IPR004827	UniProt:M4EXP5	PFAM:PF00170	PFscan:PS50217	PANTHER:PTHR13690	PANTHER:PTHR13690:SF76
SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000253F8F6	InterPro:bZIP	SEG:seg	:

Description

AT4G38900 (E=5e-115) | bZIP protein

Coordinates

chrA06:+:26115369..26117031

Molecular Weight (calculated)

49364.5 Da

IEP (calculated)

7.787

GRAVY (calculated)

-0.845

Length

446 amino acids

Sequence
(BLAST)

001: MGDTDTDMIH RHHSSIPKQK HQQQQELNPN NLIRSSASQF SSESGISKRV GVPPTSPYSQ IQILNPGPTT TTSHSRSMSQ PCSFFSLDSL PPLSPSPFLD
101: DRLTNNPSSL LPPFTSSSRA DSLPPRKSHR RSNSDIPTGL TSNPFVKKED MDDLFSAYMN LDNIDALNSS ENLSRDDMES SRASGTKTNS DTEGETSSVN
201: GDHNNNNLKR RAGGGDIAPS SRHYRSVSVD SCFIDKLSFP DDSLKPPPSP GTTRKVSPTN SVDAAPAFSI EFNNGEFTAA EMKKIMANDK LADMAISDPK
301: RVKRILANRQ SAARSKERKM RYIVELEHKV QTLQTEATTL SAQLTLLQRD MMGLTNQNNE LKFRLQSMEQ QARLRDALNE ALNGEVQRLK LAIGESSHSN
401: EADRSKMQSL NAEMFQLLNI SQLRQQQPQS QSLQNGTVST KPESNE

Best Arabidopsis Sequence Match ( AT4G38900.3 )
(BLAST)

001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.