Factsheet for Bra004689.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 6
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71000	Canola	nucleus, plastid	90.2	98.92
CDX79872	Canola	nucleus, plastid	90.2	98.57
CDY64520	Canola	nucleus, plastid	86.6	97.07
AT2G42380.2	Thale cress	nucleus, plastid	81.37	77.57
Bra003320.1-P	Field mustard	nucleus	67.32	67.76
Bra007380.1-P	Field mustard	nucleus	68.95	66.35
KRH22317	Soybean	nucleus	64.05	63.02
Bra000256.1-P	Field mustard	nucleus, plastid	73.53	62.15
VIT_12s0028g02590.t01	Wine grape	nucleus, plastid	58.82	61.02
KRH27013	Soybean	nucleus	63.73	60.94
PGSC0003DMT400024289	Potato	nucleus	59.15	59.74
KRH25692	Soybean	nucleus, plastid	64.38	59.7
KRH55826	Soybean	nucleus, plastid	65.36	58.82
Solyc07g053450.2.1	Tomato	nucleus	52.94	57.04
Solyc12g010800.1.1	Tomato	nucleus	53.27	53.27
PGSC0003DMT400020206	Potato	nucleus	52.61	52.79
Bra035464.1-P	Field mustard	nucleus	18.3	31.82
Bra027885.1-P	Field mustard	nucleus	27.12	22.25
Bra034916.1-P	Field mustard	nucleus, plastid	18.3	21.29
Bra009426.1-P	Field mustard	mitochondrion, nucleus	21.24	21.17
Bra034913.1-P	Field mustard	nucleus	15.36	21.17
Bra031541.1-P	Field mustard	nucleus	22.22	20.99
Bra030663.1-P	Field mustard	nucleus	21.9	20.94
Bra021735.1-P	Field mustard	nucleus	22.22	20.06
Bra030637.1-P	Field mustard	nucleus	24.84	19.95
Bra018250.1-P	Field mustard	nucleus	23.86	19.52
Bra032191.1-P	Field mustard	nucleus	20.59	19.09
Bra016980.1-P	Field mustard	nucleus	20.91	18.71
Bra015471.1-P	Field mustard	nucleus	23.86	18.62
Bra004582.1-P	Field mustard	nucleus	20.59	17.7
Bra000195.1-P	Field mustard	nucleus	18.63	17.07
Bra031172.1-P	Field mustard	nucleus	20.26	16.49
Bra033582.1-P	Field mustard	nucleus	22.88	15.7
Bra030314.1-P	Field mustard	plastid	23.53	15.65
Bra010722.1-P	Field mustard	nucleus	22.22	15.28
Bra031173.1-P	Field mustard	plastid	18.63	14.73

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra004689	EnsemblPlants:Bra004689.1	EnsemblPlants:Bra004689.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	UniProt:M4CKF4	PFAM:PF00170	ScanProsite:PS00036
PFscan:PS50217	PANTHER:PTHR13301	PANTHER:PTHR13301:SF134	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI00025478A1
InterPro:bZIP	SEG:seg	:	:	:	:

Description

AT2G42380 (E=7e-106) ATBZIP34, BZIP34 | bZIP transcription factor family protein

Coordinates

chrA05:-:1365803..1367275

Molecular Weight (calculated)

34407.6 Da

IEP (calculated)

7.013

GRAVY (calculated)

-0.948

Length

306 amino acids

Sequence
(BLAST)

001: MAQLPPKIPN MTPHWPDFSS QNLTATASTA VQNPSWVDEF LDFSACRRGN HRRSISDSIA FLEAPFVRGH GSTQNNHFDK FDDEQFMSMF KDDNDLHNNP
101: SHNNNNAGTT GSSSNTSTLS DHNSFNGDKE PPSDHNMKHK NDEVHSQCKT EPEDGTASNN NSGDSSVTRI LDPKRVKRIL ANRQSAQRSR VRKLQYITEL
201: ERSVTSLQAE VSVLSPRVAF LDHQRLLLNV DNSSLKQRIA ALAQDKIFKD AHQEALKREI ERLREVYQQQ SLKKMENGNH SQATGTGANS AVDIKPSNEK
301: EELFNV

Best Arabidopsis Sequence Match ( AT2G42380.2 )
(BLAST)

001: MAQLPPKIPN MTQHWPDFSS QKLSPFSTPT ATAVATATTT VQNPSWVDEF LDFSASRRGN HRRSISDSIA FLEAPTVSIE DHQFDRFDDE QFMSMFTDDD
101: NLHSNPSHIN NKNNNVGPTG SSSNTSTPSN SFNDDNKELP PSDHNMNNNI NNNYNDEVQS QCKMEPEDGT ASNNNSGDSS GNRILDPKRV KRILANRQSA
201: QRSRVRKLQY ISELERSVTS LQAEVSVLSP RVAFLDHQRL LLNVDNSALK QRIAALSQDK LFKDAHQEAL KREIERLRQV YNQQSLTNVE NANHLSATGA
301: GATPAVDIKS SVETEQLLNV S

Arabidopsis Description

BZIP34Basic leucine zipper 34 [Source:UniProtKB/Swiss-Prot;Acc:F4IN23]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.