Factsheet for Bra031541.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06231	Canola	nucleus	99.07	98.77
CDY09952	Canola	nucleus	98.46	97.26
Bra030663.1-P	Field mustard	nucleus	88.89	90.0
AT1G06850.1	Thale cress	nucleus	85.49	82.2
VIT_06s0004g08070.t01	Wine grape	plastid	57.1	54.09
KRH17183	Soybean	plastid	58.02	51.93
KRH72827	Soybean	plastid	58.33	51.92
KRG98137	Soybean	nucleus	56.79	48.42
KRH30482	Soybean	nucleus	57.1	48.05
Bra016980.1-P	Field mustard	nucleus	48.77	46.2
Bra004582.1-P	Field mustard	nucleus	50.0	45.51
Bra000195.1-P	Field mustard	nucleus	41.05	39.82
Bra034916.1-P	Field mustard	nucleus, plastid	28.4	34.98
Bra018250.1-P	Field mustard	nucleus	39.51	34.22
Bra021735.1-P	Field mustard	nucleus	34.88	33.33
Bra030637.1-P	Field mustard	nucleus	38.58	32.81
Bra032191.1-P	Field mustard	nucleus	32.41	31.82
Bra015471.1-P	Field mustard	nucleus	37.96	31.38
Bra035464.1-P	Field mustard	nucleus	14.2	26.14
Bra033582.1-P	Field mustard	nucleus	33.02	23.99
Bra031172.1-P	Field mustard	nucleus	27.78	23.94
Bra010722.1-P	Field mustard	nucleus	31.79	23.15
Bra030314.1-P	Field mustard	plastid	32.1	22.61
Bra004689.1-P	Field mustard	nucleus, plastid	20.99	22.22
Bra003320.1-P	Field mustard	nucleus	19.75	21.05
Bra007380.1-P	Field mustard	nucleus	19.75	20.13
Bra000256.1-P	Field mustard	nucleus, plastid	20.99	18.78
Bra034913.1-P	Field mustard	nucleus	12.65	18.47
Bra027885.1-P	Field mustard	nucleus	19.14	16.62
Bra031173.1-P	Field mustard	plastid	18.83	15.76
Bra009426.1-P	Field mustard	mitochondrion, nucleus	12.65	13.36

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra031541	EnsemblPlants:Bra031541.1	EnsemblPlants:Bra031541.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
UniProt:M4ERW4	PFAM:PF00170	PFscan:PS50217	PANTHER:PTHR13690	PANTHER:PTHR13690:SF82	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI0002543450	InterPro:bZIP	SEG:seg	:	:

Description

AT1G06850 (E=2e-092) AtbZIP52 | AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52); DNA binding / transcription factor

Coordinates

chrA09:-:35912251..35914111

Molecular Weight (calculated)

35843.6 Da

IEP (calculated)

5.835

GRAVY (calculated)

-0.798

Length

324 amino acids

Sequence
(BLAST)

001: MEKSDPQPPN AADPIPSSFH RRSRSDDMSM FMFMDPLSSS GPPPSSDDLP SDDDLFSSFI DVDSLSSNPH PTAIAFPNHA AANSVPSSSS RPRHRHSNSV
101: DAGCAMYANE IMDAKKAMPP EKLSELWNVD PKRAKRILAN RQSAARSKER KARYIQELER KVQSLQTEAT TLSAQLTLFQ RDTNGLANEN TELKLRLQAM
201: EQQAHLRNAL NEALRKELER MKIETGEISG NSDSFDMGMQ QVQYSPSTYM AIPPYHHGSI NNGQDMQQMH GYNPMEAMSN SQSVSEFLQN GRLQGLEISS
301: NNNSSSLVKS EGPSLSASES SSAY

Best Arabidopsis Sequence Match ( AT1G06850.1 )
(BLAST)

001: MEKSDPPPVP KPGATIIPSS DPIPNADPIP SSSFHRRSRS DDMSMFMFMD PLSSAAPPSS DDLPSDDDLF SSFIDVDSLT SNPNPFQNPS LSSNSVSGAA
101: NPPPPPSSRP RHRHSNSVDA GCAMYAGDIM DAKKAMPPEK LSELWNIDPK RAKRILANRQ SAARSKERKA RYIQELERKV QSLQTEATTL SAQLTLYQRD
201: TNGLANENTE LKLRLQAMEQ QAQLRNALNE ALRKEVERMK METGEISGNS DSFDMGMQQI QYSSSTFMAI PPYHGSMNLH DMQMHSSFNP MEMSNSQSVS
301: DFLQNGRMQG LEISSNSSSL VKSEGPSLSA SESSSAY

Arabidopsis Description

AtbZIP52AtbZIP transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8VWG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.