CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98137	Soybean	nucleus	93.25	94.47
KRH17183	Soybean	plastid	71.69	76.24
KRH72827	Soybean	plastid	71.69	75.82
VIT_06s0004g08070.t01	Wine grape	plastid	63.38	71.34
CDY35020	Canola	nucleus	27.53	60.23
CDX86512	Canola	nucleus	47.79	57.86
CDY15590	Canola	nucleus	48.05	57.63
Bra030663.1-P	Field mustard	nucleus	47.79	57.5
Bra031541.1-P	Field mustard	nucleus	48.05	57.1
CDY06231	Canola	nucleus	48.05	56.92
CDY09952	Canola	nucleus	48.31	56.71
AT1G06850.1	Thale cress	nucleus	48.83	55.79
KRH64202	Soybean	nucleus	37.14	48.31
KRH53733	Soybean	nucleus	21.56	47.16
KRH70316	Soybean	nucleus	30.91	36.06
KRH10117	Soybean	nucleus	37.4	34.29
KRH23219	Soybean	nucleus	37.14	33.41
KRH29611	Soybean	nucleus	33.25	33.25
KRH24606	Soybean	nucleus	32.99	31.99
KRH24356	Soybean	nucleus	38.44	27.01
KRH08713	Soybean	nucleus	29.87	27.0
KRH29330	Soybean	nucleus	38.7	26.75
KRH35159	Soybean	nucleus	21.56	26.18
KRH61066	Soybean	nucleus, plastid	33.77	25.34
KRH27307	Soybean	plastid	17.14	23.16
KRH22317	Soybean	nucleus	18.7	23.15
KRH05913	Soybean	nucleus	33.25	23.15
KRH22014	Soybean	nucleus, plastid	19.22	23.12
KRH17396	Soybean	nucleus	33.51	23.08
KRH27013	Soybean	nucleus	18.7	22.5
KRH25692	Soybean	nucleus, plastid	19.22	22.42
KRH55826	Soybean	nucleus, plastid	19.74	22.35
KRH59143	Soybean	nucleus	16.88	17.33
KRH43037	Soybean	nucleus	16.1	16.49
KRH51734	Soybean	nucleus	17.14	16.46

Protein Annotations

Gene3D:1.20.5.170	EntrezGene:100775607	MapMan:15.5.4.1	EMBL:ACUP02007024	ncoils:Coil	EnsemblPlantsGene:GLYMA_11G186700
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	UniProt:I1LLX5	InterPro:IPR004827	EnsemblPlants:KRH30482
ProteinID:KRH30482	ProteinID:KRH30482.1	PFAM:PF00170	PFscan:PS50217	PANTHER:PTHR13690	PANTHER:PTHR13690:SF82
SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000233C698	InterPro:bZIP	SEG:seg	:

Description

hypothetical protein

Coordinates

chr11:-:25779664..25783024

Molecular Weight (calculated)

41232.5 Da

IEP (calculated)

6.323

GRAVY (calculated)

-0.763

Length

385 amino acids

Sequence
(BLAST)

001: MATQTQDPPS NPNPNPNATS ATPSSSFFFR AGGANGASVA PVAGSGESHS HHRRAQSEVS FRLPEDMMDL SPSDPFNGGS STASFEEIGS EDDLFSTYID
101: VEKLSGGANG AGRGGNGSDQ SGYGNGAGTS GHNDGEKSSS AAAARPRHRH SSSVDGSTST CMFGEIMDAK KAMPPDKLAE LWNIDPKRAK RILANRQSAA
201: RSKERKARYI QELEHKVQTL QTEATTLSAQ LTLYQRDTTG LSSENTELKL RLQAMEQQAQ LRDALNDALM KEVERLKIAT GEALNQSESF NLGMHQMPYA
301: GPNFFSIPPH SGPSGHQNMQ LPPFGHSQST VPTHQLQQTN SHQMSDILQN DQLGRLQGLD ISSKGTPMVK SEGPSISANE SSTTF

Best Arabidopsis Sequence Match ( AT1G06850.1 )
(BLAST)

001: MEKSDPPPVP KPGATIIPSS DPIPNADPIP SSSFHRRSRS DDMSMFMFMD PLSSAAPPSS DDLPSDDDLF SSFIDVDSLT SNPNPFQNPS LSSNSVSGAA
101: NPPPPPSSRP RHRHSNSVDA GCAMYAGDIM DAKKAMPPEK LSELWNIDPK RAKRILANRQ SAARSKERKA RYIQELERKV QSLQTEATTL SAQLTLYQRD
201: TNGLANENTE LKLRLQAMEQ QAQLRNALNE ALRKEVERMK METGEISGNS DSFDMGMQQI QYSSSTFMAI PPYHGSMNLH DMQMHSSFNP MEMSNSQSVS
301: DFLQNGRMQG LEISSNSSSL VKSEGPSLSA SESSSAY

Arabidopsis Description

AtbZIP52AtbZIP transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8VWG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.