CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 5
plastid 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72827	Soybean	plastid	94.48	93.96
KRG98137	Soybean	nucleus	76.52	72.89
KRH30482	Soybean	nucleus	76.24	71.69
VIT_06s0004g08070.t01	Wine grape	plastid	66.57	70.47
CDY35020	Canola	nucleus	30.66	63.07
CDX86512	Canola	nucleus	52.21	59.43
CDY15590	Canola	nucleus	52.49	59.19
Bra030663.1-P	Field mustard	nucleus	52.21	59.06
Bra031541.1-P	Field mustard	nucleus	51.93	58.02
CDY06231	Canola	nucleus	51.93	57.85
CDY09952	Canola	nucleus	51.93	57.32
AT1G06850.1	Thale cress	nucleus	52.49	56.38
KRH53733	Soybean	nucleus	24.03	49.43
KRH64202	Soybean	nucleus	39.23	47.97
KRH70316	Soybean	nucleus	35.08	38.48
KRH10117	Soybean	nucleus	38.67	33.33
KRH29611	Soybean	nucleus	34.81	32.73
KRH23219	Soybean	nucleus	38.67	32.71
KRH24606	Soybean	nucleus	34.53	31.49
KRH08713	Soybean	nucleus	33.43	28.4
KRH24356	Soybean	nucleus	40.33	26.64
KRH29330	Soybean	nucleus	39.5	25.67
KRH27307	Soybean	plastid	19.89	25.26
KRH22014	Soybean	nucleus, plastid	22.1	25.0
KRH61066	Soybean	nucleus, plastid	35.08	24.76
KRH35159	Soybean	nucleus	21.27	24.29
KRH22317	Soybean	nucleus	20.72	24.12
KRH27013	Soybean	nucleus	20.72	23.44
KRH25692	Soybean	nucleus, plastid	21.27	23.33
KRH55826	Soybean	nucleus, plastid	21.82	23.24
KRH05913	Soybean	nucleus	33.98	22.24
KRH17396	Soybean	nucleus	33.7	21.82
KRH59143	Soybean	nucleus	19.61	18.93
KRH43037	Soybean	nucleus	18.78	18.09
KRH51734	Soybean	nucleus	18.23	16.46

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:778172	EMBL:ACUP02009057	ncoils:Coil	EnsemblPlantsGene:GLYMA_14G204100
GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
UniProt:I1MBK7	InterPro:IPR004827	EnsemblPlants:KRH17183	ProteinID:KRH17183	ProteinID:KRH17183.1	PFAM:PF00170
PFscan:PS50217	PANTHER:PTHR13690	PANTHER:PTHR13690:SF82	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000233B577
InterPro:bZIP	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:46886862..46890243

Molecular Weight (calculated)

39061.5 Da

IEP (calculated)

6.658

GRAVY (calculated)

-0.739

Length

362 amino acids

Sequence
(BLAST)

001: MQDPSSNPNS NPNPNPHNAN AASQLPRPPP ATTAGAGASS SSLFARSGGP HHRRAHSEVS FRLPDDMMDL SPSDPFAGGS STASMEEIGS EDDLFSTYID
101: VDKLGGANGS GASGNGADPT GETEKSPARP RHRHSSSVDF GEIMDAKKAM PPDKLAELWT IDPKRAKRIL ANRQSAARSK ERKARYIQEL ERKVQTLQTE
201: ATTLSAQLTL YQRDTTGLST ENTELKLRLQ AMEQQAQLRD ALNEALKKEV ERLKVATGEM MSHTDSFNLG MHLMPFSGSN FVPIPPQSGP SGHQNMQMPP
301: FGLTPSTMPS HLLHQTSSHP YSEILQNDQL GRFQGLDISS KGSTLVKSEG PSLSASESST TF

Best Arabidopsis Sequence Match ( AT2G40620.1 )
(BLAST)

001: MEDPSNPQPN QSNLSQCPPL ATAPTPAPVR GPYHRRAHSE VQFRLPEDLD LSEPFGGFDE LGSEDDLFCS YMDIEKLGSG SGSASDSAGP SAPRSDNPFS
101: AENGGAEAGN SRPRHRHSLS VDGSSTLESI EAKKAMAPDK LAELWVVDPK RAKRIIANRQ SAARSKERKA RYILELERKV QTLQTEATTL SAQLSLFQRD
201: TTGLSSENTE LKLRLQVMEQ QAKLRDALNE QLKKEVERLK FATGEVSPAD AYNLGMAHMQ YQQQPQQSFF QHHHQQQTDA QNLQQMTHQF HLFQPNNNQN
301: QSSRTNPPTA HQLMHHATSN APAQSHSYSE AMHEDHLGRL QGLDISSCGR GSNFGRSDTV SESSSTM

Arabidopsis Description

BZIP18bZIP transcription factor 18 [Source:UniProtKB/Swiss-Prot;Acc:O22873]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.