CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30482	Soybean	nucleus	94.47	93.25
KRH17183	Soybean	plastid	72.89	76.52
KRH72827	Soybean	plastid	72.63	75.82
VIT_06s0004g08070.t01	Wine grape	plastid	65.26	72.51
CDY35020	Canola	nucleus	27.89	60.23
CDX86512	Canola	nucleus	47.89	57.23
Bra031541.1-P	Field mustard	nucleus	48.42	56.79
CDY15590	Canola	nucleus	47.89	56.7
CDY06231	Canola	nucleus	48.42	56.62
Bra030663.1-P	Field mustard	nucleus	47.63	56.56
CDY09952	Canola	nucleus	48.68	56.4
AT1G06850.1	Thale cress	nucleus	49.47	55.79
KRH64202	Soybean	nucleus	37.37	47.97
KRH53733	Soybean	nucleus	21.58	46.59
KRH70316	Soybean	nucleus	31.32	36.06
KRH10117	Soybean	nucleus	38.42	34.76
KRH23219	Soybean	nucleus	38.16	33.88
KRH29611	Soybean	nucleus	33.95	33.51
KRH24606	Soybean	nucleus	33.68	32.24
KRH08713	Soybean	nucleus	30.26	27.0
KRH24356	Soybean	nucleus	36.84	25.55
KRH29330	Soybean	nucleus	37.11	25.31
KRH35159	Soybean	nucleus	20.79	24.92
KRH61066	Soybean	nucleus, plastid	33.42	24.76
KRH27307	Soybean	plastid	17.37	23.16
KRH22014	Soybean	nucleus, plastid	19.47	23.12
KRH22317	Soybean	nucleus	18.68	22.83
KRH05913	Soybean	nucleus	32.63	22.42
KRH17396	Soybean	nucleus	32.89	22.36
KRH27013	Soybean	nucleus	18.68	22.19
KRH25692	Soybean	nucleus, plastid	19.21	22.12
KRH55826	Soybean	nucleus, plastid	19.74	22.06
KRH59143	Soybean	nucleus	16.84	17.07
KRH43037	Soybean	nucleus	16.05	16.22
KRH51734	Soybean	nucleus	16.84	15.96

Protein Annotations

Gene3D:1.20.5.170	EntrezGene:100790732	MapMan:15.5.4.1	EMBL:ACUP02010845	ncoils:Coil	EnsemblPlantsGene:GLYMA_18G052500
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	UniProt:K7MQ32	EnsemblPlants:KRG98137
ProteinID:KRG98137	ProteinID:KRG98137.1	PFAM:PF00170	PFscan:PS50217	PANTHER:PTHR13690	PANTHER:PTHR13690:SF82
SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000233E882	InterPro:bZIP	SEG:seg	:

Description

hypothetical protein

Coordinates

chr18:+:4546048..4549328

Molecular Weight (calculated)

40972.3 Da

IEP (calculated)

6.579

GRAVY (calculated)

-0.762

Length

380 amino acids

Sequence
(BLAST)

001: MATQTQDPRS NPNPNPNAMS ATPSSSFFIR AAGGNGPSAA PVAGSGESHS HHRRAHSEVS FRLPDDMIDL SPSDPFNGGS STASFEEIGS EDDLFSTYID
101: VEKLGAGRGG NGSDQSGYGN GAGSSCYNDG EKSPSTAAAR PRHRHSSSVD GSTSTSMFGE IMDAKKAMPP DKLAELWNID PKRAKRILAN RQSAARSKER
201: KARYIQELER KVQTLQTEAT TLSAQLTLYQ RDTTGLSSEN TELKLRLQAM EQQAQLRDVL NDALMKEVER LKIATGEALN QSESFNLGMH QMPYAGSNFF
301: SIPPHSGPSG HQNMQLPPFG HSHSTVPTHQ LQQTNSHQMS DILQNDQLGR LQGLDISSKG TPVVKSEGPS ISANESSTTF

Best Arabidopsis Sequence Match ( AT2G40620.1 )
(BLAST)

001: MEDPSNPQPN QSNLSQCPPL ATAPTPAPVR GPYHRRAHSE VQFRLPEDLD LSEPFGGFDE LGSEDDLFCS YMDIEKLGSG SGSASDSAGP SAPRSDNPFS
101: AENGGAEAGN SRPRHRHSLS VDGSSTLESI EAKKAMAPDK LAELWVVDPK RAKRIIANRQ SAARSKERKA RYILELERKV QTLQTEATTL SAQLSLFQRD
201: TTGLSSENTE LKLRLQVMEQ QAKLRDALNE QLKKEVERLK FATGEVSPAD AYNLGMAHMQ YQQQPQQSFF QHHHQQQTDA QNLQQMTHQF HLFQPNNNQN
301: QSSRTNPPTA HQLMHHATSN APAQSHSYSE AMHEDHLGRL QGLDISSCGR GSNFGRSDTV SESSSTM

Arabidopsis Description

BZIP18bZIP transcription factor 18 [Source:UniProtKB/Swiss-Prot;Acc:O22873]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.