Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15590 | Canola | nucleus | 98.11 | 97.2 |
| CDY06231 | Canola | nucleus | 90.25 | 88.31 |
| CDY09952 | Canola | nucleus | 89.94 | 87.2 |
| CDY35020 | Canola | nucleus | 46.54 | 84.09 |
| AT1G06850.1 | Thale cress | nucleus | 86.48 | 81.6 |
| VIT_06s0004g08070.t01 | Wine grape | plastid | 57.55 | 53.51 |
| KRH17183 | Soybean | plastid | 59.43 | 52.21 |
| KRH72827 | Soybean | plastid | 59.12 | 51.65 |
| KRG98137 | Soybean | nucleus | 57.23 | 47.89 |
| KRH30482 | Soybean | nucleus | 57.86 | 47.79 |
| CDX93167 | Canola | nucleus | 51.26 | 47.52 |
| CDY06974 | Canola | nucleus | 51.57 | 46.59 |
| CDY23889 | Canola | nucleus | 51.57 | 46.2 |
| CDX79976 | Canola | nucleus | 50.94 | 45.51 |
| CDY24896 | Canola | nucleus | 46.23 | 43.36 |
| CDY07597 | Canola | nucleus | 41.82 | 39.82 |
| CDY48943 | Canola | nucleus | 29.25 | 38.59 |
| CDY56611 | Canola | nucleus | 39.62 | 34.24 |
| CDY19094 | Canola | nucleus | 33.96 | 33.96 |
| CDY10799 | Canola | nucleus | 39.62 | 33.96 |
| CDY15560 | Canola | nucleus | 39.94 | 33.33 |
| CDY15381 | Canola | nucleus | 37.74 | 32.43 |
| CDY10170 | Canola | nucleus | 39.94 | 32.32 |
| CDY47713 | Canola | nucleus | 39.62 | 32.14 |
| CDX86537 | Canola | nucleus | 39.62 | 32.06 |
| CDX80722 | Canola | nucleus | 32.39 | 31.99 |
| CDY30752 | Canola | nucleus | 31.76 | 30.61 |
| CDY13830 | Canola | nucleus, plastid | 27.04 | 28.01 |
| CDY71925 | Canola | nucleus | 21.38 | 26.77 |
| CDY22561 | Canola | nucleus, plastid | 21.38 | 25.37 |
| CDY12108 | Canola | nucleus | 33.33 | 24.88 |
| CDX72732 | Canola | nucleus | 34.28 | 24.72 |
| CDY35379 | Canola | nucleus, plastid | 20.75 | 24.63 |
| CDX71974 | Canola | nucleus, plastid | 20.44 | 24.34 |
| CDX82008 | Canola | nucleus | 28.3 | 24.19 |
| CDY22407 | Canola | nucleus | 33.65 | 24.04 |
| CDX99610 | Canola | nucleus | 33.33 | 23.98 |
| CDY15909 | Canola | plastid | 33.33 | 23.87 |
| CDX90298 | Canola | nucleus | 32.7 | 23.74 |
| CDX71000 | Canola | nucleus, plastid | 20.44 | 23.3 |
| CDY06053 | Canola | nucleus | 20.75 | 23.24 |
| CDX79872 | Canola | nucleus, plastid | 20.44 | 23.21 |
| CDY56238 | Canola | extracellular | 9.75 | 23.13 |
| CDY64520 | Canola | nucleus, plastid | 19.81 | 23.08 |
| CDX98266 | Canola | nucleus, plastid | 20.44 | 21.81 |
| CDY46864 | Canola | nucleus | 17.92 | 17.07 |
| CDY23807 | Canola | nucleus | 17.92 | 16.96 |
| CDX82009 | Canola | plastid | 19.81 | 16.45 |
| CDY39913 | Canola | nucleus | 19.18 | 16.44 |
| CDY70502 | Canola | nucleus | 19.81 | 16.32 |
| CDY29162 | Canola | nucleus | 19.18 | 16.31 |
| CDY13828 | Canola | plastid | 18.87 | 15.5 |
| CDY48939 | Canola | nucleus | 14.15 | 14.56 |
| CDX80717 | Canola | nucleus, plastid | 14.15 | 14.06 |
| CDY44883 | Canola | mitochondrion, nucleus | 12.89 | 13.4 |
| CDX70198 | Canola | mitochondrion, nucleus | 12.89 | 13.36 |
| CDY13829 | Canola | cytosol | 0.31 | 9.09 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078DBY1 | EnsemblPlants:CDX86512 | ProteinID:CDX86512 | ProteinID:CDX86512.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00145119001 | InterPro:IPR004827 | PFAM:PF07716 |
| PFscan:PS50217 | PANTHER:PTHR13690 | PANTHER:PTHR13690:SF82 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EF238B |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BnaC08g01910D
Coordinates
chrLK031846:-:363588..365419
Molecular Weight (calculated)
35149.9 Da
IEP (calculated)
5.228
GRAVY (calculated)
-0.802
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKPDPPPNP NADPVPSSFH RRSRSDDMSM FMFTDPLSSA APPSSDDLPS DDDLFSSFID VDSLSSNPDP PISFPDPSPA VPPSSSSRPR HRHSNSVDAG
101: CAMYAGDEIM DAKKAMPPEK LSELWSIDPK RAKRILANRQ SAARSKERKA RYIQELVRRV QSLQTEATTL SAQLTLFQRD TNGLANENTE LKMRLQAMEQ
201: QAHLRNALNE ALRKEVERMK METGEISGNS DSFDMGMQQV QYSPSTFMAI PPYHHGSINN GQDMQQMRGF NQMSNSQSVS EFLQNGRLQG LEISSNNSSS
301: LVKSEGPSLS GSESSSAY
101: CAMYAGDEIM DAKKAMPPEK LSELWSIDPK RAKRILANRQ SAARSKERKA RYIQELVRRV QSLQTEATTL SAQLTLFQRD TNGLANENTE LKMRLQAMEQ
201: QAHLRNALNE ALRKEVERMK METGEISGNS DSFDMGMQQV QYSPSTFMAI PPYHHGSINN GQDMQQMRGF NQMSNSQSVS EFLQNGRLQG LEISSNNSSS
301: LVKSEGPSLS GSESSSAY
001: MEKSDPPPVP KPGATIIPSS DPIPNADPIP SSSFHRRSRS DDMSMFMFMD PLSSAAPPSS DDLPSDDDLF SSFIDVDSLT SNPNPFQNPS LSSNSVSGAA
101: NPPPPPSSRP RHRHSNSVDA GCAMYAGDIM DAKKAMPPEK LSELWNIDPK RAKRILANRQ SAARSKERKA RYIQELERKV QSLQTEATTL SAQLTLYQRD
201: TNGLANENTE LKLRLQAMEQ QAQLRNALNE ALRKEVERMK METGEISGNS DSFDMGMQQI QYSSSTFMAI PPYHGSMNLH DMQMHSSFNP MEMSNSQSVS
301: DFLQNGRMQG LEISSNSSSL VKSEGPSLSA SESSSAY
101: NPPPPPSSRP RHRHSNSVDA GCAMYAGDIM DAKKAMPPEK LSELWNIDPK RAKRILANRQ SAARSKERKA RYIQELERKV QSLQTEATTL SAQLTLYQRD
201: TNGLANENTE LKLRLQAMEQ QAQLRNALNE ALRKEVERMK METGEISGNS DSFDMGMQQI QYSSSTFMAI PPYHGSMNLH DMQMHSSFNP MEMSNSQSVS
301: DFLQNGRMQG LEISSNSSSL VKSEGPSLSA SESSSAY
Arabidopsis Description
AtbZIP52AtbZIP transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8VWG0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.