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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035464.1-P Field mustard nucleus 51.5 97.73
CDY23807 Canola nucleus 97.6 97.02
AT1G58110.2 Thale cress nucleus 80.84 72.19
CDY29162 Canola nucleus 75.15 67.11
CDY39913 Canola nucleus 73.95 66.58
VIT_12s0035g00620.t01 Wine grape nucleus 53.89 48.13
KRH59143 Soybean nucleus 52.99 47.2
KRH43037 Soybean nucleus 52.99 47.07
PGSC0003DMT400064169 Potato nucleus 48.8 44.66
TraesCS4B01G108000.1 Wheat nucleus 44.61 43.06
TraesCS4A01G204300.1 Wheat nucleus 44.61 43.06
TraesCS4D01G105100.1 Wheat mitochondrion 44.31 42.77
Zm00001d049135_P001 Maize mitochondrion 44.61 42.69
Os11t0218000-01 Rice nucleus 46.11 42.31
KXG28232 Sorghum mitochondrion 45.21 42.18
Zm00001d041831_P001 Maize mitochondrion 43.71 41.95
KXG23197 Sorghum mitochondrion 44.61 41.27
GSMUA_Achr8P29390_001 Banana nucleus 44.91 40.98
Os12t0194600-01 Rice nucleus 43.71 39.57
HORVU5Hr1G031130.2 Barley mitochondrion 41.32 38.33
GSMUA_Achr9P00300_001 Banana nucleus 41.32 36.7
HORVU4Hr1G016340.4 Barley nucleus, plastid 44.61 36.16
GSMUA_Achr3P02820_001 Banana golgi 41.92 34.91
Solyc10g044830.1.1 Tomato nucleus 24.85 33.6
Zm00001d035240_P001 Maize nucleus 21.86 32.3
CDY48939 Canola nucleus 27.84 30.1
CDY64520 Canola nucleus, plastid 24.25 29.67
CDY35379 Canola nucleus, plastid 23.35 29.1
CDX71000 Canola nucleus, plastid 24.25 29.03
CDX71974 Canola nucleus, plastid 23.05 28.84
CDY22561 Canola nucleus, plastid 23.05 28.73
CDX79872 Canola nucleus, plastid 23.95 28.57
CDX80717 Canola nucleus, plastid 27.25 28.44
CDY06053 Canola nucleus 23.95 28.17
CDY13829 Canola cytosol 0.9 27.27
CDY56238 Canola extracellular 10.78 26.87
CDX98266 Canola nucleus, plastid 23.95 26.85
CDX70198 Canola mitochondrion, nucleus 21.56 23.45
CDY44883 Canola mitochondrion, nucleus 21.26 23.2
CDY48943 Canola nucleus 15.27 21.16
CDY35020 Canola nucleus 11.08 21.02
CDY19094 Canola nucleus 19.46 20.44
CDX80722 Canola nucleus 18.56 19.25
CDY30752 Canola nucleus 18.86 19.09
CDY71925 Canola nucleus 14.07 18.5
CDY15381 Canola nucleus 20.36 18.38
CDY15560 Canola nucleus 20.96 18.37
CDY10170 Canola nucleus 21.26 18.07
CDY56611 Canola nucleus 19.76 17.93
CDX86512 Canola nucleus 17.07 17.92
CDY47713 Canola nucleus 20.96 17.86
CDX86537 Canola nucleus 20.96 17.81
CDY10799 Canola nucleus 19.76 17.79
CDY15590 Canola nucleus 17.07 17.76
CDY06974 Canola nucleus 18.56 17.61
CDY06231 Canola nucleus 17.07 17.54
CDY09952 Canola nucleus 17.07 17.38
CDX93167 Canola nucleus 17.66 17.2
CDY13830 Canola nucleus, plastid 15.57 16.94
CDY23889 Canola nucleus 17.66 16.62
CDX82008 Canola nucleus 18.26 16.4
CDX79976 Canola nucleus 17.37 16.29
CDY24896 Canola nucleus 16.47 16.22
CDY15909 Canola plastid 20.06 15.09
CDX99610 Canola nucleus 19.76 14.93
CDY07597 Canola nucleus 14.67 14.67
CDX82009 Canola plastid 16.77 14.62
CDY70502 Canola nucleus 16.47 14.25
CDY22407 Canola nucleus 18.26 13.71
CDY13828 Canola plastid 15.87 13.7
CDY12108 Canola nucleus 17.37 13.62
CDX72732 Canola nucleus 17.96 13.61
CDX90298 Canola nucleus 17.07 13.01
Protein Annotations
MapMan:15.5.4.1GO:A0A078IBX9UniProt:A0A078IBX9EnsemblPlants:CDY46864ProteinID:CDY46864ProteinID:CDY46864.1
ncoils:CoilGO:GO:0003674GO:GO:0003700GO:GO:0006139GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00086315001InterPro:IPR004827PANTHER:PTHR13301
PANTHER:PTHR13301:SF25SMART:SM00338SUPFAM:SSF57959UniParc:UPI0004EE1159InterPro:bZIPSEG:seg
Description
BnaC01g27680DBnaC01g27680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBX9]
Coordinates
chrLK032688:-:29596..32058
Molecular Weight (calculated)
37388.5 Da
IEP (calculated)
9.909
GRAVY (calculated)
-0.908
Length
334 amino acids
Sequence
(BLAST)
001: MAGTKGSESV RSLMNPGKSA LLPPKIPFPS GSMGSRHSHK VSVEKAHQRT SSESHLVEEE LPFWLDDLLN EPESPARKSG HRRSASDSYA YLDVANAATT
101: ISDFSYRNPA ASIQRGIQEL DPSQDASFYA DGSFLKQRNR PSGARPSWTR ESVGGGKHMG ASSYMSQDAT AETKRFSSEE NNSNPQPGAY EADNTKRAKQ
201: QFAQRSRVRK LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSLENK ALKHRLESIA QEKLIKQLEQ EVLEREIGRL RALHQQQQHT RQQSASHKRA
301: SSKDLDSQFS TLSLNAKDSN CRRDSLSVMG QFHF
Best Arabidopsis Sequence Match ( AT1G58110.1 )
(BLAST)
001: MASSKGSQSV RNLMYPGKHA LLPPKIPFPS VSASYSEYIP TGLIGSRHGQ KLSNEKTHHQ RTSSESHLVE ELPFWLDDLL NEQPESPARK CGHRRSSSDS
101: YAYLDVANAT NISLTLQNDF SYRNTVLSTQ RGVQELDRNK NAQDAAFYSG ASFLKQKSRQ RDSLVATGAC PSWLPFAREN GGGKNLGALY MSQDATVISS
201: ERKNYAEPFS HDPKMLSSEE NNSNPSPVTY EADNTKRAKQ QFAQRSRVRK LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSMENK ALKKRLESIA
301: QEKLIKQLEQ EVLEKEIGRL RALYQQQQQT QKPSASRGRA TSKDLDSQFS SLSLNTKDSN CRRDSVSVMG QFHF
Arabidopsis Description
Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I9R1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.