Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035464.1-P | Field mustard | nucleus | 40.11 | 85.23 |
| CDY23807 | Canola | nucleus | 73.26 | 81.55 |
| CDY46864 | Canola | nucleus | 72.19 | 80.84 |
| VIT_12s0035g00620.t01 | Wine grape | nucleus | 53.74 | 53.74 |
| KRH59143 | Soybean | nucleus | 53.74 | 53.6 |
| KRH43037 | Soybean | nucleus | 52.94 | 52.66 |
| PGSC0003DMT400064169 | Potato | nucleus | 49.73 | 50.96 |
| AT4G06598.1 | Thale cress | nucleus | 31.82 | 44.91 |
| TraesCS4A01G204300.1 | Wheat | nucleus | 41.44 | 44.8 |
| TraesCS4D01G105100.1 | Wheat | mitochondrion | 41.18 | 44.51 |
| TraesCS4B01G108000.1 | Wheat | nucleus | 41.18 | 44.51 |
| Os11t0218000-01 | Rice | nucleus | 42.51 | 43.68 |
| GSMUA_Achr8P29390_001 | Banana | nucleus | 42.51 | 43.44 |
| KXG28232 | Sorghum | mitochondrion | 41.44 | 43.3 |
| Zm00001d049135_P001 | Maize | mitochondrion | 40.37 | 43.27 |
| Zm00001d041831_P001 | Maize | mitochondrion | 39.57 | 42.53 |
| KXG23197 | Sorghum | mitochondrion | 40.64 | 42.11 |
| Solyc10g044830.1.1 | Tomato | nucleus | 27.27 | 41.3 |
| Os12t0194600-01 | Rice | nucleus | 40.64 | 41.19 |
| GSMUA_Achr9P00300_001 | Banana | nucleus | 40.37 | 40.16 |
| HORVU5Hr1G031130.2 | Barley | mitochondrion | 38.5 | 40.0 |
| GSMUA_Achr3P02820_001 | Banana | golgi | 40.11 | 37.41 |
| HORVU4Hr1G016340.4 | Barley | nucleus, plastid | 40.91 | 37.14 |
| Zm00001d035240_P001 | Maize | nucleus | 19.79 | 32.74 |
| AT1G35490.1 | Thale cress | nucleus | 24.06 | 30.0 |
| AT2G42380.2 | Thale cress | nucleus, plastid | 22.73 | 26.48 |
| AT3G58120.1 | Thale cress | nucleus | 22.19 | 25.23 |
| AT5G04840.1 | Thale cress | plastid | 19.52 | 23.78 |
| AT1G43700.1 | Thale cress | nucleus | 17.11 | 18.77 |
| AT1G06850.1 | Thale cress | nucleus | 16.58 | 18.4 |
| AT2G31370.6 | Thale cress | nucleus | 19.52 | 18.34 |
| AT1G06070.1 | Thale cress | nucleus | 19.79 | 17.49 |
| AT2G40620.1 | Thale cress | nucleus | 17.11 | 17.44 |
| AT2G13150.1 | Thale cress | plastid | 11.76 | 16.79 |
| AT2G21230.3 | Thale cress | nucleus | 20.05 | 14.29 |
| AT2G12900.1 | Thale cress | plastid | 9.89 | 14.02 |
| AT2G12940.1 | Thale cress | plastid | 10.7 | 13.61 |
| AT4G38900.1 | Thale cress | nucleus | 20.05 | 13.56 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:842178 | UniProt:A0A178W8V5 | ProteinID:AEE33499.1 | ProteinID:AEE33500.1 |
| ArrayExpress:AT1G58110 | EnsemblPlantsGene:AT1G58110 | RefSeq:AT1G58110 | TAIR:AT1G58110 | RefSeq:AT1G58110-TAIR-G | EnsemblPlants:AT1G58110.2 |
| TAIR:AT1G58110.2 | ncoils:Coil | UniProt:F4I9R1 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045893 | InterPro:IPR004827 | RefSeq:NP_001031205.1 | RefSeq:NP_176108.3 |
| ProteinID:OAP14201.1 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR13301 | PANTHER:PTHR13301:SF25 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI000034F4BA | InterPro:bZIP | SEG:seg | : | : | : |
Description
Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I9R1]
Coordinates
chr1:-:21515405..21518270
Molecular Weight (calculated)
42103.3 Da
IEP (calculated)
9.789
GRAVY (calculated)
-0.826
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSKGSQSV RNLMYPGKHA LLPPKIPFPS VSASYSEYIP TGLIGSRHGQ KLSNEKTHHQ RTSSESHLVE ELPFWLDDLL NEQPESPARK CGHRRSSSDS
101: YAYLDVANAT NISLTLQNDF SYRNTVLSTQ RGVQELDRNK NAQDAAFYSG ASFLKQKSRQ RDSLVATGAC PSWLPFAREN GGGKNLGALY MSQDATVISS
201: ERKNYAEPFS HDPKMLSSEE NNSNPSPVTY EADNTKRAKQ QFAQRSRVRK LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSMENK ALKKRLESIA
301: QEKLIKQLEQ EVLEKEIGRL RALYQQQQQT QKPSASRGRA TSKDLDSQFS SLSLNTKDSN CRRDSVSVMG QFHF
101: YAYLDVANAT NISLTLQNDF SYRNTVLSTQ RGVQELDRNK NAQDAAFYSG ASFLKQKSRQ RDSLVATGAC PSWLPFAREN GGGKNLGALY MSQDATVISS
201: ERKNYAEPFS HDPKMLSSEE NNSNPSPVTY EADNTKRAKQ QFAQRSRVRK LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSMENK ALKKRLESIA
301: QEKLIKQLEQ EVLEKEIGRL RALYQQQQQT QKPSASRGRA TSKDLDSQFS SLSLNTKDSN CRRDSVSVMG QFHF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.