Factsheet for GSMUA_Achr8P29390_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0035g00620.t01	Wine grape	nucleus	55.74	54.55
Bra035464.1-P	Field mustard	nucleus	25.96	53.98
KRH59143	Soybean	nucleus	53.28	52.0
KRH43037	Soybean	nucleus	53.01	51.6
KXG28232	Sorghum	mitochondrion	48.36	49.44
Os11t0218000-01	Rice	nucleus	48.63	48.9
TraesCS4B01G108000.1	Wheat	nucleus	46.17	48.84
Zm00001d049135_P001	Maize	mitochondrion	46.45	48.71
GSMUA_Achr9P00300_001	Banana	nucleus	50.0	48.67
Zm00001d041831_P001	Maize	mitochondrion	46.17	48.56
KXG23197	Sorghum	mitochondrion	47.81	48.48
TraesCS4A01G204300.1	Wheat	nucleus	45.36	47.98
TraesCS4D01G105100.1	Wheat	mitochondrion	45.36	47.98
PGSC0003DMT400064169	Potato	nucleus	47.81	47.95
Os12t0194600-01	Rice	nucleus	47.81	47.43
GSMUA_Achr3P02820_001	Banana	golgi	50.0	45.64
CDY46864	Canola	nucleus	40.98	44.91
CDY23807	Canola	nucleus	40.98	44.64
Solyc11g020950.1.1	Tomato	nucleus	39.34	44.17
HORVU5Hr1G031130.2	Barley	mitochondrion	43.17	43.89
PGSC0003DMT400024003	Potato	nucleus	40.98	43.23
Bra027885.1-P	Field mustard	nucleus	43.72	42.9
AT1G58110.2	Thale cress	nucleus	43.44	42.51
CDY39913	Canola	nucleus	42.9	42.32
CDY29162	Canola	nucleus	43.17	42.25
HORVU4Hr1G016340.4	Barley	nucleus, plastid	45.9	40.78
VIT_18s0001g03010.t01	Wine grape	nucleus	30.05	40.44
Solyc10g044830.1.1	Tomato	nucleus	26.23	38.87
AT4G06598.1	Thale cress	nucleus	26.78	36.98
Zm00001d035240_P001	Maize	nucleus	20.77	33.63
GSMUA_Achr3P03550_001	Banana	nucleus	21.31	33.62
GSMUA_Achr6P26930_001	Banana	nucleus	22.13	32.02
AT1G35490.1	Thale cress	nucleus	26.23	32.0
GSMUA_Achr9P06540_001	Banana	nucleus	21.31	31.97
GSMUA_Achr3P31390_001	Banana	nucleus	19.4	31.84
CDY48939	Canola	nucleus	26.5	31.39
Bra034913.1-P	Field mustard	nucleus	18.85	31.08
GSMUA_Achr7P25310_001	Banana	nucleus	22.95	30.43
CDX80717	Canola	nucleus, plastid	25.96	29.69
GSMUA_Achr4P10560_001	Banana	nucleus	19.67	26.57
GSMUA_Achr3P19190_001	Banana	nucleus	23.5	25.22
GSMUA_Achr10P...	Banana	nucleus	21.04	23.55
GSMUA_Achr5P17400_001	Banana	nucleus	22.68	21.45
GSMUA_Achr3P19170_001	Banana	nucleus	11.2	20.5
GSMUA_Achr6P13040_001	Banana	nucleus	15.85	20.42
GSMUA_Achr11P...	Banana	nucleus	16.67	19.55
GSMUA_Achr6P18130_001	Banana	nucleus	15.57	19.45
GSMUA_Achr11P...	Banana	nucleus	18.58	18.18
GSMUA_Achr5P25700_001	Banana	nucleus	17.49	18.03
GSMUA_Achr10P...	Banana	nucleus	15.3	17.89
GSMUA_Achr6P32530_001	Banana	nucleus	15.57	17.87
GSMUA_AchrUn_...	Banana	nucleus	19.4	17.79
GSMUA_Achr2P18830_001	Banana	nucleus	13.93	17.71
GSMUA_Achr5P20200_001	Banana	nucleus	12.57	16.55
GSMUA_Achr10P...	Banana	nucleus	14.75	16.07
GSMUA_Achr11P...	Banana	mitochondrion, nucleus	18.31	15.8
GSMUA_Achr11P...	Banana	nucleus	19.13	15.62
GSMUA_AchrUn_...	Banana	nucleus	14.75	15.61
GSMUA_Achr3P12290_001	Banana	nucleus	21.31	15.6
GSMUA_Achr1P08090_001	Banana	nucleus, plastid	19.67	15.45
GSMUA_Achr5P29650_001	Banana	nucleus	15.57	14.96
GSMUA_Achr8P12090_001	Banana	nucleus	18.31	14.16

Protein Annotations

EnsemblPlants:GSMUA_Achr8P29390_001	EnsemblPlants:GSMUA_Achr8T29390_001	EnsemblPlantsGene:GSMUA_Achr8G29390_001	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
InterPro:bZIP	ncoils:Coil	PANTHER:PTHR13301	PANTHER:PTHR13301:SF25	SEG:seg	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI0002950702	UniProt:M0TUP2	MapMan:15.5.4.1	:	:

Description

Putative bZIP transcription factor domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G29390_001]

Coordinates

chr8:-:31791506..31798983

Molecular Weight (calculated)

41434.6 Da

IEP (calculated)

8.449

GRAVY (calculated)

-0.895

Length

366 amino acids

Sequence
(BLAST)

001: MANMRAAANM RSSAPGGKQS FLPPRCPLPT VSPSYGDYGS IGPRGIPRPK DGQRHQRTSS ESFLIEEQPL WLDDLLNEPE TPVRRGAHRR STSDSFAYLD
101: GVSLSNVGSV GQEQQSFPAL SPWMSQELNH HKDVGHFSYY PEANSSGRPQ LKVWESAADV VSYPGSTLLA NNKTIHPQPS CVQTESDGLN PDVVEKNEHL
201: DGVQDKKGPF EIKEDSHSKQ TEMDSKRVKQ QYAQRSRVRK LQYIAELEKH VQALQAKGLE VFAELEFLDQ QNLILNLENK ALKQRLDSLA QEKLIKRLQQ
301: ETLEREIARL RTLYQQQQQQ QRFQEQPHPT HARRSSRDLD SQFANLSLKP KDKTSGCESV TGPLRF

Best Arabidopsis Sequence Match ( AT1G58110.1 )
(BLAST)

001: MASSKGSQSV RNLMYPGKHA LLPPKIPFPS VSASYSEYIP TGLIGSRHGQ KLSNEKTHHQ RTSSESHLVE ELPFWLDDLL NEQPESPARK CGHRRSSSDS
101: YAYLDVANAT NISLTLQNDF SYRNTVLSTQ RGVQELDRNK NAQDAAFYSG ASFLKQKSRQ RDSLVATGAC PSWLPFAREN GGGKNLGALY MSQDATVISS
201: ERKNYAEPFS HDPKMLSSEE NNSNPSPVTY EADNTKRAKQ QFAQRSRVRK LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSMENK ALKKRLESIA
301: QEKLIKQLEQ EVLEKEIGRL RALYQQQQQT QKPSASRGRA TSKDLDSQFS SLSLNTKDSN CRRDSVSVMG QFHF

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I9R1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.