Factsheet for GSMUA_Achr6P26930_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P06540_001	Banana	nucleus	84.19	87.3
GSMUA_Achr3P31390_001	Banana	nucleus	53.36	60.54
GSMUA_Achr3P03550_001	Banana	nucleus	54.55	59.48
GSMUA_Achr7P25310_001	Banana	nucleus	62.85	57.61
TraesCS3B01G167500.1	Wheat	nucleus	65.61	56.85
TraesCS3D01G148200.1	Wheat	nucleus	67.59	56.07
Zm00001d039383_P001	Maize	nucleus	63.64	55.9
TraesCS2D01G144300.1	Wheat	nucleus	66.4	54.9
TraesCS2A01G140900.1	Wheat	nucleus	66.01	54.58
GSMUA_Achr4P10560_001	Banana	nucleus	58.1	54.24
TraesCS2B01G165700.1	Wheat	nucleus	65.22	53.75
KRH22014	Soybean	nucleus, plastid	65.61	51.88
KRH27307	Soybean	plastid	57.31	50.88
VIT_19s0014g01780.t01	Wine grape	nucleus	61.66	50.49
PGSC0003DMT400032381	Potato	nucleus, plastid	56.52	49.48
Solyc07g062710.2.1	Tomato	nucleus, plastid	58.89	49.34
HORVU3Hr1G040920.8	Barley	nucleus	60.87	49.2
Os01t0211800-01	Rice	extracellular, nucleus	61.66	47.27
TraesCS3A01G131900.1	Wheat	nucleus	58.1	46.23
EES00074	Sorghum	nucleus, plastid	67.19	41.26
GSMUA_Achr3P19170_001	Banana	nucleus	18.58	23.5
GSMUA_Achr2P18830_001	Banana	nucleus	25.69	22.57
GSMUA_Achr8P29390_001	Banana	nucleus	32.02	22.13
GSMUA_Achr5P20200_001	Banana	nucleus	23.72	21.58
GSMUA_Achr11P...	Banana	nucleus	26.09	21.15
GSMUA_Achr6P13040_001	Banana	nucleus	23.72	21.13
GSMUA_Achr5P25700_001	Banana	nucleus	29.64	21.13
GSMUA_Achr3P19190_001	Banana	nucleus	28.06	20.82
GSMUA_AchrUn_...	Banana	nucleus	28.06	20.52
GSMUA_Achr6P18130_001	Banana	nucleus	23.72	20.48
GSMUA_Achr6P32530_001	Banana	nucleus	25.69	20.38
GSMUA_Achr9P00300_001	Banana	nucleus	30.04	20.21
GSMUA_Achr10P...	Banana	nucleus	24.9	20.13
GSMUA_Achr11P...	Banana	nucleus	29.25	19.79
GSMUA_AchrUn_...	Banana	nucleus	29.64	18.8
GSMUA_Achr3P02820_001	Banana	golgi	29.25	18.45
GSMUA_Achr10P...	Banana	nucleus	23.32	18.04
GSMUA_Achr5P17400_001	Banana	nucleus	26.48	17.31
GSMUA_Achr5P29650_001	Banana	nucleus	25.69	17.06
GSMUA_Achr10P...	Banana	nucleus	22.53	16.96
GSMUA_Achr8P12090_001	Banana	nucleus	31.62	16.91
GSMUA_Achr11P...	Banana	nucleus	29.64	16.74
GSMUA_Achr11P...	Banana	mitochondrion, nucleus	27.67	16.51
GSMUA_Achr3P12290_001	Banana	nucleus	32.41	16.4
GSMUA_Achr1P08090_001	Banana	nucleus, plastid	27.67	15.02

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr6G26930_001	EnsemblPlants:GSMUA_Achr6P26930_001	EnsemblPlants:GSMUA_Achr6T26930_001	InterPro:IPR004827
UniProt:M0TAI8	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR13301	PANTHER:PTHR13301:SF134
SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0002968513	InterPro:bZIP	SEG:seg	:

Description

bZIP transcription factor domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G26930_001]

Coordinates

chr6:-:27555724..27557105

Molecular Weight (calculated)

27995.1 Da

IEP (calculated)

9.771

GRAVY (calculated)

-0.701

Length

253 amino acids

Sequence
(BLAST)

001: MAQLPPKIPS NMSPNWPNLG HHAIPPSFLP IAPPLAPGSQ PSWVDEFLDF SSAKRGNHRR SLMSMFSDDV PPSSLSGAVP ASSSSTPSDH NSFNEDKPTD
101: QKAKNESEEA QSACKEEPQA VAQPATGTET IVDPKRVKRI LANRQSAQRS RVRKLQYISE LERSVTTLQT EVSALSPRVA FLDHQRSLLT LGNSHLKQRI
201: AALAQDKIFK DAHQEALKKE IERLRQVYHQ QNLKKMAPPT SEPAVSTEKE LLS

Best Arabidopsis Sequence Match ( AT3G58120.1 )
(BLAST)

001: MAQLPPKIPT MTTPNWPDFS SQKLPSIAAT AAAAATAGPQ QQNPSWMDEF LDFSATRRGT HRRSISDSIA FLEPPSSGVG NHHFDRFDDE QFMSMFNDDV
101: HNNNHNHHHH HSINGNVGPT RSSSNTSTPS DHNSLSDDDN NKEAPPSDHD HHMDNNVANQ NNAAGNNYNE SDEVQSQCKT EPQDGPSANQ NSGGSSGNRI
201: HDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQTE VSVLSPRVAF LDHQRLLLNV DNSAIKQRIA ALAQDKIFKD AHQEALKREI ERLRQVYHQQ
301: SLKKMENNVS DQSPADIKPS VEKEQLLNV

Arabidopsis Description

BZIP61BZIP61 [Source:UniProtKB/TrEMBL;Acc:A0A178VLL5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.