Factsheet for TraesCS3D01G148200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G167500.1	Wheat	nucleus	88.85	92.81
TraesCS2D01G144300.1	Wheat	nucleus	89.18	88.89
HORVU3Hr1G040920.8	Barley	nucleus	79.34	77.32
TraesCS3A01G131900.1	Wheat	nucleus	80.0	76.73
Zm00001d039383_P001	Maize	nucleus	71.48	75.69
Os01t0211800-01	Rice	extracellular, nucleus	75.08	69.39
GSMUA_Achr6P26930_001	Banana	nucleus	56.07	67.59
GSMUA_Achr9P06540_001	Banana	nucleus	53.11	66.39
TraesCS3D01G293500.1	Wheat	nucleus	49.84	56.72
EES00074	Sorghum	nucleus, plastid	75.74	56.07
TraesCS5D01G148700.1	Wheat	nucleus	43.93	56.07
VIT_19s0014g01780.t01	Wine grape	nucleus	53.11	52.43
KRH22014	Soybean	nucleus, plastid	53.44	50.94
KRH27307	Soybean	plastid	47.54	50.88
PGSC0003DMT400032381	Potato	nucleus, plastid	43.93	46.37
Solyc07g062710.2.1	Tomato	nucleus, plastid	45.9	46.36
TraesCS4D01G105100.1	Wheat	mitochondrion	27.54	24.28
TraesCS6D01G187300.1	Wheat	nucleus	23.93	22.6
TraesCS5D01G308600.1	Wheat	nucleus	26.23	21.28
TraesCS4D01G171700.2	Wheat	nucleus	24.59	21.07
TraesCS7D01G268400.1	Wheat	nucleus	24.92	20.65
TraesCS2D01G105400.1	Wheat	nucleus	24.26	20.11
TraesCS4D01G316900.1	Wheat	nucleus	17.05	20.08
TraesCS4D01G110900.1	Wheat	nucleus	20.98	19.39
TraesCS5D01G132300.1	Wheat	nucleus	20.98	19.28
TraesCS1D01G191000.1	Wheat	nucleus, plastid	23.61	18.65
TraesCS7D01G269300.1	Wheat	nucleus	25.25	16.28
TraesCS5D01G315400.1	Wheat	plastid	20.98	13.7

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR13301	PANTHER:PTHR13301:SF48	SMART:SM00338
SUPFAM:SSF57959	EnsemblPlantsGene:TraesCS3D01G148200	EnsemblPlants:TraesCS3D01G148200.1	InterPro:bZIP	TIGR:cd14703	SEG:seg

Description

No Description!

Coordinates

chr3D:+:112960872..112962101

Molecular Weight (calculated)

32931.2 Da

IEP (calculated)

6.844

GRAVY (calculated)

-0.728

Length

305 amino acids

Sequence
(BLAST)

001: MAQLPPKIPA MAPAWPEFGG GHHHGAHARH HHHQRSPSMG AFLAAPMPPL PPPAPAGGGA AQQQPSWVDE FLDFSAAKRG AHRRTVSDSV AFLDDSNAGV
101: GAHEFDRLDD DQLMSMFSDE LAPQRQAASA SSPSDHNSVN DEKQDKGDAE EAQSDCNGDG AAPGQPSSPA TVDPKRVKRI IANRQSAQRS RVRKLHYISE
201: LERSVTSLQT EVSALSPRVA FLDHQRSLLT LGNSHLKQRI AALAQDKIFK DAHQDALKKE IERLRQVYQQ QSLRNAEPPA HDDGPLVRGD NSNGLIASEG
301: TAAPS

Best Arabidopsis Sequence Match ( AT3G58120.1 )
(BLAST)

001: MAQLPPKIPT MTTPNWPDFS SQKLPSIAAT AAAAATAGPQ QQNPSWMDEF LDFSATRRGT HRRSISDSIA FLEPPSSGVG NHHFDRFDDE QFMSMFNDDV
101: HNNNHNHHHH HSINGNVGPT RSSSNTSTPS DHNSLSDDDN NKEAPPSDHD HHMDNNVANQ NNAAGNNYNE SDEVQSQCKT EPQDGPSANQ NSGGSSGNRI
201: HDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQTE VSVLSPRVAF LDHQRLLLNV DNSAIKQRIA ALAQDKIFKD AHQEALKREI ERLRQVYHQQ
301: SLKKMENNVS DQSPADIKPS VEKEQLLNV

Arabidopsis Description

BZIP61BZIP61 [Source:UniProtKB/TrEMBL;Acc:A0A178VLL5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.