Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g062710.2.1 | Tomato | nucleus, plastid | 96.89 | 92.72 |
| GSMUA_Achr6P26930_001 | Banana | nucleus | 49.48 | 56.52 |
| VIT_19s0014g01780.t01 | Wine grape | nucleus | 60.21 | 56.31 |
| GSMUA_Achr9P06540_001 | Banana | nucleus | 47.4 | 56.15 |
| GSMUA_Achr3P31390_001 | Banana | nucleus | 42.91 | 55.61 |
| KRH27307 | Soybean | plastid | 53.29 | 54.04 |
| GSMUA_Achr3P03550_001 | Banana | nucleus | 43.25 | 53.88 |
| TraesCS5B01G142200.1 | Wheat | nucleus | 42.91 | 51.88 |
| TraesCS5D01G148700.1 | Wheat | nucleus | 42.91 | 51.88 |
| HORVU5Hr1G045690.1 | Barley | nucleus | 42.91 | 51.67 |
| KRH22014 | Soybean | nucleus, plastid | 57.09 | 51.56 |
| PGSC0003DMT400024289 | Potato | nucleus | 53.98 | 51.49 |
| TraesCS5A01G143300.1 | Wheat | nucleus | 42.56 | 51.46 |
| Zm00001d016154_P001 | Maize | nucleus | 43.6 | 50.0 |
| Os01t0756200-01 | Rice | nucleus | 45.67 | 49.81 |
| EES01493 | Sorghum | nucleus | 47.06 | 49.28 |
| HORVU3Hr1G072770.1 | Barley | nucleus | 45.33 | 49.25 |
| GSMUA_Achr4P10560_001 | Banana | nucleus | 46.02 | 49.08 |
| Zm00001d039383_P001 | Maize | nucleus | 48.79 | 48.96 |
| GSMUA_Achr7P25310_001 | Banana | nucleus | 46.71 | 48.91 |
| TraesCS3D01G293500.1 | Wheat | nucleus | 45.33 | 48.88 |
| TraesCS3B01G328400.1 | Wheat | nucleus | 45.33 | 48.88 |
| EES04836 | Sorghum | nucleus | 43.6 | 48.65 |
| Zm00001d043420_P001 | Maize | nucleus | 46.71 | 48.56 |
| PGSC0003DMT400020206 | Potato | nucleus | 50.87 | 48.2 |
| Zm00001d053442_P001 | Maize | nucleus | 42.91 | 48.06 |
| Zm00001d012719_P001 | Maize | nucleus | 44.98 | 46.43 |
| TraesCS2D01G144300.1 | Wheat | nucleus | 47.4 | 44.77 |
| TraesCS3A01G293700.2 | Wheat | nucleus | 45.33 | 43.96 |
| TraesCS3D01G148200.1 | Wheat | nucleus | 46.37 | 43.93 |
| TraesCS3B01G167500.1 | Wheat | nucleus | 44.29 | 43.84 |
| TraesCS2A01G140900.1 | Wheat | nucleus | 46.37 | 43.79 |
| TraesCS2B01G165700.1 | Wheat | nucleus | 45.33 | 42.67 |
| HORVU3Hr1G040920.8 | Barley | nucleus | 42.21 | 38.98 |
| Os01t0211800-01 | Rice | extracellular, nucleus | 44.29 | 38.79 |
| TraesCS3A01G131900.1 | Wheat | nucleus | 40.83 | 37.11 |
| EES00074 | Sorghum | nucleus, plastid | 50.52 | 35.44 |
| PGSC0003DMT400064169 | Potato | nucleus | 28.72 | 22.74 |
| PGSC0003DMT400074878 | Potato | mitochondrion, nucleus | 19.72 | 21.84 |
| PGSC0003DMT400042946 | Potato | plastid | 22.84 | 20.37 |
| PGSC0003DMT400005064 | Potato | nucleus | 21.11 | 19.93 |
| PGSC0003DMT400024003 | Potato | nucleus | 23.88 | 19.88 |
| PGSC0003DMT400045314 | Potato | nucleus | 22.15 | 19.63 |
| PGSC0003DMT400070968 | Potato | nucleus | 23.18 | 19.2 |
| PGSC0003DMT400002100 | Potato | nucleus | 22.49 | 19.12 |
| PGSC0003DMT400009538 | Potato | nucleus | 23.88 | 15.54 |
| PGSC0003DMT400004178 | Potato | nucleus | 26.99 | 13.52 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | UniProt:M1AXB9 | PFAM:PF00170 | EnsemblPlantsGene:PGSC0003DMG400012436 |
| PGSC:PGSC0003DMG400012436 | EnsemblPlants:PGSC0003DMT400032381 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR13301 | PANTHER:PTHR13301:SF134 |
| SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI00029659A8 | InterPro:bZIP | SEG:seg | : |
Description
Transcription factor RF2a [Source:PGSC_GENE;Acc:PGSC0003DMG400012436]
Coordinates
chr7:-:52862558..52865779
Molecular Weight (calculated)
32141.2 Da
IEP (calculated)
5.916
GRAVY (calculated)
-0.780
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHNWPFQNM PPLPNSSTIV ANHHSTNSWV DDFLDFSSSR RNSHRRSVSD PIAFVEAPFL QQCRGNGLNN GFDKLDDEQL TTMFSDDSGA GAAFAVTAPC
101: SNPSSTNPST PSDQVSENED QKSPVRLEVN QVVQPKNEPG EDDSDNQSPV ASKNAVNDSS DNNSIVDPKR IKRILANRQS AQRSRVRKLQ YISELERSVT
201: TLQTEVSALS PRVAFLDHQR LLLNVDNSAL RQRIAALAQD KIFKDAHQEA LKKEIERLRQ IYHEQNMKKM NTADAPPSTA APMSCTEEA
101: SNPSSTNPST PSDQVSENED QKSPVRLEVN QVVQPKNEPG EDDSDNQSPV ASKNAVNDSS DNNSIVDPKR IKRILANRQS AQRSRVRKLQ YISELERSVT
201: TLQTEVSALS PRVAFLDHQR LLLNVDNSAL RQRIAALAQD KIFKDAHQEA LKKEIERLRQ IYHEQNMKKM NTADAPPSTA APMSCTEEA
001: MAQLPPKIPT MTTPNWPDFS SQKLPSIAAT AAAAATAGPQ QQNPSWMDEF LDFSATRRGT HRRSISDSIA FLEPPSSGVG NHHFDRFDDE QFMSMFNDDV
101: HNNNHNHHHH HSINGNVGPT RSSSNTSTPS DHNSLSDDDN NKEAPPSDHD HHMDNNVANQ NNAAGNNYNE SDEVQSQCKT EPQDGPSANQ NSGGSSGNRI
201: HDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQTE VSVLSPRVAF LDHQRLLLNV DNSAIKQRIA ALAQDKIFKD AHQEALKREI ERLRQVYHQQ
301: SLKKMENNVS DQSPADIKPS VEKEQLLNV
101: HNNNHNHHHH HSINGNVGPT RSSSNTSTPS DHNSLSDDDN NKEAPPSDHD HHMDNNVANQ NNAAGNNYNE SDEVQSQCKT EPQDGPSANQ NSGGSSGNRI
201: HDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQTE VSVLSPRVAF LDHQRLLLNV DNSAIKQRIA ALAQDKIFKD AHQEALKREI ERLRQVYHQQ
301: SLKKMENNVS DQSPADIKPS VEKEQLLNV
Arabidopsis Description
BZIP61BZIP61 [Source:UniProtKB/TrEMBL;Acc:A0A178VLL5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.