Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G148700.1 | Wheat | nucleus | 97.08 | 97.49 |
| TraesCS5B01G142200.1 | Wheat | nucleus | 96.25 | 96.65 |
| TraesCS5A01G143300.1 | Wheat | nucleus | 96.25 | 96.65 |
| EES04836 | Sorghum | nucleus | 77.5 | 71.81 |
| Zm00001d016154_P001 | Maize | nucleus | 74.58 | 71.03 |
| Zm00001d053442_P001 | Maize | nucleus | 75.0 | 69.77 |
| GSMUA_Achr3P03550_001 | Banana | nucleus | 57.5 | 59.48 |
| HORVU3Hr1G072770.1 | Barley | nucleus | 55.42 | 50.0 |
| GSMUA_Achr7P25310_001 | Banana | nucleus | 57.08 | 49.64 |
| GSMUA_Achr3P31390_001 | Banana | nucleus | 45.83 | 49.33 |
| GSMUA_Achr4P10560_001 | Banana | nucleus | 52.08 | 46.13 |
| KRH27307 | Soybean | plastid | 53.33 | 44.91 |
| KRH22014 | Soybean | nucleus, plastid | 57.92 | 43.44 |
| VIT_19s0014g01780.t01 | Wine grape | nucleus | 55.42 | 43.04 |
| PGSC0003DMT400032381 | Potato | nucleus, plastid | 51.67 | 42.91 |
| Solyc07g062710.2.1 | Tomato | nucleus, plastid | 53.75 | 42.72 |
| HORVU3Hr1G040920.8 | Barley | nucleus | 51.25 | 39.3 |
| HORVU3Hr1G109890.1 | Barley | cytosol | 7.92 | 30.65 |
| HORVU6Hr1G051110.4 | Barley | nucleus | 26.25 | 19.57 |
| HORVU5Hr1G031130.2 | Barley | mitochondrion | 29.17 | 19.44 |
| HORVU4Hr1G020540.1 | Barley | nucleus | 25.83 | 19.2 |
| HORVU4Hr1G050190.1 | Barley | nucleus | 27.5 | 18.59 |
| HORVU7Hr1G056230.2 | Barley | nucleus | 26.67 | 17.53 |
| HORVU5Hr1G039870.5 | Barley | nucleus, plastid | 25.0 | 16.81 |
| HORVU4Hr1G083000.1 | Barley | nucleus | 27.08 | 16.67 |
| HORVU2Hr1G085560.4 | Barley | nucleus, plastid | 26.67 | 16.58 |
| HORVU4Hr1G016340.4 | Barley | nucleus, plastid | 28.33 | 16.5 |
| HORVU5Hr1G079160.11 | Barley | vacuole | 29.17 | 15.73 |
| HORVU4Hr1G053410.2 | Barley | cytosol | 23.33 | 14.74 |
| HORVU7Hr1G056490.1 | Barley | nucleus, plastid | 28.33 | 13.18 |
| HORVU2Hr1G017820.1 | Barley | nucleus | 19.17 | 12.57 |
| HORVU5Hr1G080140.1 | Barley | nucleus, plastid | 23.75 | 12.36 |
| HORVU1Hr1G049310.2 | Barley | nucleus | 19.17 | 10.72 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU5Hr1G045690 |
| EnsemblPlants:HORVU5Hr1G045690.1 | InterPro:IPR004827 | UniProt:M0W040 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 |
| PANTHER:PTHR13301 | PANTHER:PTHR13301:SF50 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000296D830 | InterPro:bZIP |
Description
No Description!
Coordinates
chrchr5H:+:353627956..353630666
Molecular Weight (calculated)
26210.1 Da
IEP (calculated)
6.404
GRAVY (calculated)
-0.475
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQLPPRAPS GVEQDWPVAG EFLGFAAARR GVHRRSASDS AAFLEAVPMD HILSGGGGGD DEFDRLDDEQ LMSMFSNVDG GCDRPGFMDT GEAEEGTPSA
101: GAMAATDGFG DPKRVKRILA NRQSAQRSRV RKLQYISELE RSVTGLQMEV SALSPRVAFL DHQRSLLTVG NSHLRQRIAA LAQDKIFKDA HQEALKEEIE
201: RLRQLFHHQK IKATGGTDMA TATSMQAKQE LLMCEGAAMR
101: GAMAATDGFG DPKRVKRILA NRQSAQRSRV RKLQYISELE RSVTGLQMEV SALSPRVAFL DHQRSLLTVG NSHLRQRIAA LAQDKIFKDA HQEALKEEIE
201: RLRQLFHHQK IKATGGTDMA TATSMQAKQE LLMCEGAAMR
001: MAQLPPKIPN MTQHWPDFSS QKLSPFSTPT ATAVATATTT VQNPSWVDEF LDFSASRRGN HRRSISDSIA FLEAPTVSIE DHQFDRFDDE QFMSMFTDDD
101: NLHSNPSHIN NKNNNVGPTG SSSNTSTPSN SFNDDNKELP PSDHNMNNNI NNNYNDEVQS QCKMEPEDGT ASNNNSGDSS GNRILDPKRV KRILANRQSA
201: QRSRVRKLQY ISELERSVTS LQAEVSVLSP RVAFLDHQRL LLNVDNSALK QRIAALSQDK LFKDAHQEAL KREIERLRQV YNQQSLTNVE NANHLSATGA
301: GATPAVDIKS SVETEQLLNV S
101: NLHSNPSHIN NKNNNVGPTG SSSNTSTPSN SFNDDNKELP PSDHNMNNNI NNNYNDEVQS QCKMEPEDGT ASNNNSGDSS GNRILDPKRV KRILANRQSA
201: QRSRVRKLQY ISELERSVTS LQAEVSVLSP RVAFLDHQRL LLNVDNSALK QRIAALSQDK LFKDAHQEAL KREIERLRQV YNQQSLTNVE NANHLSATGA
301: GATPAVDIKS SVETEQLLNV S
Arabidopsis Description
BZIP34Basic leucine zipper 34 [Source:UniProtKB/Swiss-Prot;Acc:F4IN23]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.