Factsheet for HORVU3Hr1G072770.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G293500.1	Wheat	nucleus	96.99	96.27
TraesCS3B01G328400.1	Wheat	nucleus	96.62	95.9
TraesCS3A01G293700.2	Wheat	nucleus	94.74	84.56
Os01t0756200-01	Rice	nucleus	74.81	75.09
EES01493	Sorghum	nucleus	76.32	73.55
Zm00001d012719_P001	Maize	nucleus	76.69	72.86
Zm00001d043420_P001	Maize	nucleus	75.56	72.3
HORVU5Hr1G045690.1	Barley	nucleus	50.0	55.42
KRH27307	Soybean	plastid	51.88	48.42
KRH22014	Soybean	nucleus, plastid	56.02	46.56
VIT_19s0014g01780.t01	Wine grape	nucleus	53.76	46.28
Solyc07g062710.2.1	Tomato	nucleus, plastid	51.5	45.36
PGSC0003DMT400032381	Potato	nucleus, plastid	49.25	45.33
HORVU3Hr1G040920.8	Barley	nucleus	51.5	43.77
HORVU3Hr1G109890.1	Barley	cytosol	7.14	30.65
HORVU6Hr1G051110.4	Barley	nucleus	25.94	21.43
HORVU4Hr1G050190.1	Barley	nucleus	27.82	20.85
HORVU4Hr1G020540.1	Barley	nucleus	24.81	20.43
HORVU7Hr1G056230.2	Barley	nucleus	26.69	19.45
HORVU5Hr1G031130.2	Barley	mitochondrion	25.94	19.17
HORVU4Hr1G083000.1	Barley	nucleus	25.94	17.69
HORVU5Hr1G039870.5	Barley	nucleus, plastid	23.68	17.65
HORVU2Hr1G085560.4	Barley	nucleus, plastid	25.56	17.62
HORVU4Hr1G016340.4	Barley	nucleus, plastid	27.07	17.48
HORVU4Hr1G053410.2	Barley	cytosol	23.68	16.58
HORVU5Hr1G079160.11	Barley	vacuole	26.69	15.96
HORVU2Hr1G017820.1	Barley	nucleus	20.68	15.03
HORVU7Hr1G056490.1	Barley	nucleus, plastid	27.82	14.34
HORVU5Hr1G080140.1	Barley	nucleus, plastid	24.06	13.88
HORVU1Hr1G049310.2	Barley	nucleus	20.3	12.59

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU3Hr1G072770
EnsemblPlants:HORVU3Hr1G072770.1	InterPro:IPR004827	UniProt:M0Y6Q9	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR13301	PANTHER:PTHR13301:SF48	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000295B88A	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:547843568..547846953

Molecular Weight (calculated)

28756.5 Da

IEP (calculated)

6.046

GRAVY (calculated)

-0.726

Length

266 amino acids

Sequence
(BLAST)

001: MAQLPPKIPM AAGAHHWPGA GAGVEHHGHG PAVVWADEFA EFAAARRGAH RRSLSDSVAF VEMAPGGCGG AGDFDRLDDD QLMSMFPDEG GSTAPGSENG
101: TSDSDGKERY DDGQNDDANP EEPGGPGQAT PTSSTETIRD PKRVKRILAN RQSAQRSRVR KLQYISELER CVTTLQNEVS VLSPRVAFLD QQRTILTVGN
201: SHLKQRIAAL AQDKLFKDAH QEALKEEIER LRQVYQQQNL RMSSGAGAAS DHGGPPPVRA EKELMS

Best Arabidopsis Sequence Match ( AT2G42380.2 )
(BLAST)

001: MAQLPPKIPN MTQHWPDFSS QKLSPFSTPT ATAVATATTT VQNPSWVDEF LDFSASRRGN HRRSISDSIA FLEAPTVSIE DHQFDRFDDE QFMSMFTDDD
101: NLHSNPSHIN NKNNNVGPTG SSSNTSTPSN SFNDDNKELP PSDHNMNNNI NNNYNDEVQS QCKMEPEDGT ASNNNSGDSS GNRILDPKRV KRILANRQSA
201: QRSRVRKLQY ISELERSVTS LQAEVSVLSP RVAFLDHQRL LLNVDNSALK QRIAALSQDK LFKDAHQEAL KREIERLRQV YNQQSLTNVE NANHLSATGA
301: GATPAVDIKS SVETEQLLNV S

Arabidopsis Description

BZIP34Basic leucine zipper 34 [Source:UniProtKB/Swiss-Prot;Acc:F4IN23]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.