Factsheet for TraesCS3D01G293500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G328400.1	Wheat	nucleus	98.88	98.88
HORVU3Hr1G072770.1	Barley	nucleus	96.27	96.99
TraesCS3A01G293700.2	Wheat	nucleus	97.01	87.25
Os01t0756200-01	Rice	nucleus	76.12	76.98
EES01493	Sorghum	nucleus	77.24	75.0
Zm00001d012719_P001	Maize	nucleus	77.24	73.93
Zm00001d043420_P001	Maize	nucleus	76.49	73.74
TraesCS5D01G148700.1	Wheat	nucleus	48.88	54.81
TraesCS3D01G148200.1	Wheat	nucleus	56.72	49.84
KRH27307	Soybean	plastid	52.24	49.12
TraesCS2D01G144300.1	Wheat	nucleus	54.85	48.04
KRH22014	Soybean	nucleus, plastid	56.34	47.19
VIT_19s0014g01780.t01	Wine grape	nucleus	53.73	46.6
Solyc07g062710.2.1	Tomato	nucleus, plastid	51.12	45.36
PGSC0003DMT400032381	Potato	nucleus, plastid	48.88	45.33
TraesCS6D01G187300.1	Wheat	nucleus	25.75	21.36
TraesCS4D01G171700.2	Wheat	nucleus	27.61	20.79
TraesCS4D01G105100.1	Wheat	mitochondrion	26.49	20.52
TraesCS2D01G105400.1	Wheat	nucleus	27.99	20.38
TraesCS4D01G110900.1	Wheat	nucleus	25.0	20.3
TraesCS4D01G316900.1	Wheat	nucleus	19.4	20.08
TraesCS1D01G191000.1	Wheat	nucleus, plastid	28.73	19.95
TraesCS5D01G132300.1	Wheat	nucleus	23.88	19.28
TraesCS5D01G308600.1	Wheat	nucleus	26.87	19.15
TraesCS7D01G268400.1	Wheat	nucleus	26.12	19.02
TraesCS7D01G269300.1	Wheat	nucleus	27.24	15.43
TraesCS5D01G315400.1	Wheat	plastid	23.13	13.28

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR13301	PANTHER:PTHR13301:SF48	SMART:SM00338
SUPFAM:SSF57959	EnsemblPlantsGene:TraesCS3D01G293500	EnsemblPlants:TraesCS3D01G293500.1	InterPro:bZIP	TIGR:cd14703	SEG:seg

Description

No Description!

Coordinates

chr3D:+:403933581..403937787

Molecular Weight (calculated)

29046.7 Da

IEP (calculated)

6.288

GRAVY (calculated)

-0.786

Length

268 amino acids

Sequence
(BLAST)

001: MAQLPPKIPT AATGAHHWPG AGVEHHGHGP AAVWADEFAE FAAARRGAHR RSLSDSVAFV EMAPGGCGGA GDFDRLDDDQ LMSMFPDEGG STAPGSENGT
101: SDSDGDKHGK DRYDDGHNDD ANPEEPGPGQ ATPTSSTETI RDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERCVTTLQNE VSVLSPRVAF LDQQRTILTV
201: GNSHLKQRIA ALAQDKLFKD AHQEALKEEI ERLRQVYQQQ NLRMSSGAGA ASDHGGPPPV RAEKELMS

Best Arabidopsis Sequence Match ( AT2G42380.1 )
(BLAST)

001: MAQLPPKIPN MTQHWPDFSS QKLSPFSTPT ATAVATATTT VQNPSWVDEF LDFSASRRGN HRRSISDSIA FLEAPTVSIE DHQFDRFDDE QFMSMFTDDD
101: NLHSNPSHIN NKNNNVGPTG SSSNTSTPSN SFNDDNKELP PSDHNMNNNI NNNYNDEVQS QCKMEPEDGT ASNNNSGDSS GNRILDPKRV KRILANRQSA
201: QRSRVRKLQY ISELELLSPR VAFLDHQRLL LNVDNSALKQ RIAALSQDKL FKDAHQEALK REIERLRQVY NQQSLTNVEN ANHLSATGAG ATPAVDIKSS
301: VETEQLLNVS

Arabidopsis Description

BZIP34Basic leucine zipper 34 [Source:UniProtKB/Swiss-Prot;Acc:F4IN23]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.