Factsheet for TraesCS3A01G293700.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G293500.1	Wheat	nucleus	87.25	97.01
TraesCS3B01G328400.1	Wheat	nucleus	86.24	95.9
HORVU3Hr1G072770.1	Barley	nucleus	84.56	94.74
Os01t0756200-01	Rice	nucleus	66.78	75.09
EES01493	Sorghum	nucleus	67.45	72.83
Zm00001d012719_P001	Maize	nucleus	68.12	72.5
Zm00001d043420_P001	Maize	nucleus	66.78	71.58
TraesCS5A01G143300.1	Wheat	nucleus	43.62	54.39
KRH27307	Soybean	plastid	46.31	48.42
TraesCS2A01G140900.1	Wheat	nucleus	48.66	47.39
KRH22014	Soybean	nucleus, plastid	50.0	46.56
VIT_19s0014g01780.t01	Wine grape	nucleus	47.99	46.28
Solyc07g062710.2.1	Tomato	nucleus, plastid	45.97	45.36
PGSC0003DMT400032381	Potato	nucleus, plastid	43.96	45.33
TraesCS3A01G131900.1	Wheat	nucleus	43.96	41.2
TraesCS4A01G204300.1	Wheat	nucleus	24.16	20.81
TraesCS6A01G203200.1	Wheat	nucleus	22.48	20.74
TraesCS5A01G491600.1	Wheat	nucleus	17.79	20.7
TraesCS4A01G135600.2	Wheat	nucleus	24.5	20.51
TraesCS2A01G105700.1	Wheat	nucleus, plastid	25.17	20.38
TraesCS4A01G209900.1	Wheat	nucleus	22.15	19.94
TraesCS1A01G186000.1	Wheat	plastid	25.84	19.69
TraesCS5A01G124600.1	Wheat	nucleus	21.81	19.58
TraesCS7A01G266400.1	Wheat	nucleus	23.15	18.9
TraesCS5A01G299400.1	Wheat	nucleus	23.83	18.83
TraesCS2A01G352100.1	Wheat	nucleus	22.15	17.69
TraesCS7A01G268700.1	Wheat	nucleus	24.83	15.85
TraesCS5A01G308400.1	Wheat	nucleus	21.14	12.35

Protein Annotations

EnsemblPlants:TraesCS3A01G293700.2	EnsemblPlantsGene:TraesCS3A01G293700	Gene3D:1.20.5.170	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
InterPro:bZIP	ncoils:Coil	PANTHER:PTHR13301	PANTHER:PTHR13301:SF48	PFAM:PF00170	ScanProsite:PS00036
SEG:seg	SMART:SM00338	SUPFAM:SSF57959	TIGR:cd14703	MapMan:15.5.4.1	:

Description

No Description!

Coordinates

chr3A:+:526508553..526511005

Molecular Weight (calculated)

32446.0 Da

IEP (calculated)

6.626

GRAVY (calculated)

-0.661

Length

298 amino acids

Sequence
(BLAST)

001: MAQLPPKIPT GAHHWPGAGV EHHGHAPAAV WADEFAEFAA ARRGAHRRSL SDSVAFVEMA PGGCGGAGDF DRLDDDQLMS MFPDEGGSTA PGSEKSDSDG
101: DKHGKDRYDD GHNDDANPEE PGPGHATPTS STETIRDPKR VKRCARNANA CMHGCDSLIN VLIIKLDLHG PTELCVSRIL ANRQSAQRSR VRKLQYISEL
201: ERCVTTLQNE VSVLSPRVAF LDQQRTILTV GNSHLKQRIA ALAQDKLFKD AHQEALKEEI ERLRQVYQQQ NLRMSSGAGA ASDHGGPPPV RAEKELMS

Best Arabidopsis Sequence Match ( AT2G42380.1 )
(BLAST)

001: MAQLPPKIPN MTQHWPDFSS QKLSPFSTPT ATAVATATTT VQNPSWVDEF LDFSASRRGN HRRSISDSIA FLEAPTVSIE DHQFDRFDDE QFMSMFTDDD
101: NLHSNPSHIN NKNNNVGPTG SSSNTSTPSN SFNDDNKELP PSDHNMNNNI NNNYNDEVQS QCKMEPEDGT ASNNNSGDSS GNRILDPKRV KRILANRQSA
201: QRSRVRKLQY ISELELLSPR VAFLDHQRLL LNVDNSALKQ RIAALSQDKL FKDAHQEALK REIERLRQVY NQQSLTNVEN ANHLSATGAG ATPAVDIKSS
301: VETEQLLNVS

Arabidopsis Description

BZIP34Basic leucine zipper 34 [Source:UniProtKB/Swiss-Prot;Acc:F4IN23]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.