Factsheet for TraesCS5A01G143300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G142200.1	Wheat	nucleus	99.16	99.16
TraesCS5D01G148700.1	Wheat	nucleus	98.33	98.33
HORVU5Hr1G045690.1	Barley	nucleus	96.65	96.25
Zm00001d016154_P001	Maize	nucleus	76.15	72.22
EES04836	Sorghum	nucleus	77.82	71.81
Zm00001d053442_P001	Maize	nucleus	75.73	70.16
GSMUA_Achr3P03550_001	Banana	nucleus	56.9	58.62
GSMUA_Achr3P31390_001	Banana	nucleus	46.44	49.78
GSMUA_Achr7P25310_001	Banana	nucleus	56.49	48.91
GSMUA_Achr4P10560_001	Banana	nucleus	51.88	45.76
KRH27307	Soybean	plastid	52.3	43.86
TraesCS3A01G293700.2	Wheat	nucleus	54.39	43.62
TraesCS2A01G140900.1	Wheat	nucleus	55.23	43.14
PGSC0003DMT400032381	Potato	nucleus, plastid	51.46	42.56
KRH22014	Soybean	nucleus, plastid	56.9	42.5
Solyc07g062710.2.1	Tomato	nucleus, plastid	53.56	42.38
VIT_19s0014g01780.t01	Wine grape	nucleus	54.39	42.07
TraesCS3A01G131900.1	Wheat	nucleus	49.79	37.42
TraesCS5A01G491600.1	Wheat	nucleus	21.34	19.92
TraesCS6A01G203200.1	Wheat	nucleus	26.36	19.5
TraesCS4A01G204300.1	Wheat	nucleus	27.62	19.08
TraesCS5A01G299400.1	Wheat	nucleus	29.71	18.83
TraesCS4A01G209900.1	Wheat	nucleus	25.94	18.73
TraesCS4A01G135600.2	Wheat	nucleus	27.62	18.54
TraesCS5A01G124600.1	Wheat	nucleus	25.52	18.37
TraesCS7A01G266400.1	Wheat	nucleus	27.62	18.08
TraesCS2A01G105700.1	Wheat	nucleus, plastid	27.2	17.66
TraesCS1A01G186000.1	Wheat	plastid	28.87	17.65
TraesCS2A01G352100.1	Wheat	nucleus	27.2	17.43
TraesCS7A01G268700.1	Wheat	nucleus	28.87	14.78
TraesCS5A01G308400.1	Wheat	nucleus	24.27	11.37

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR13301	PANTHER:PTHR13301:SF50	SMART:SM00338
SUPFAM:SSF57959	EnsemblPlantsGene:TraesCS5A01G143300	EnsemblPlants:TraesCS5A01G143300.1	InterPro:bZIP	TIGR:cd14703	SEG:seg

Description

No Description!

Coordinates

chr5A:+:317693583..317696253

Molecular Weight (calculated)

26052.9 Da

IEP (calculated)

6.404

GRAVY (calculated)

-0.447

Length

239 amino acids

Sequence
(BLAST)

001: MAQLPPRAPS AGEQDWPVAG EFLGFAAARR GVHRRSASDP AAFLEAVPMD HILSGGGGDD EFDRFDDEQL MSMFSNVDGG CDRPGFMDTG EAEEGAASAG
101: AMAAADGFGD PKRVKRILAN RQSAQRSRVR KLQYISELER SVTGLQMEVS ALSPRVAFLD HQRSLLTVGN SHLRQRIAAL AQDKIFKDAH QEALKEEIER
201: LRQLFHHQKI KATGGTDMAT AASMQAKQEL LMCEGAAMR

Best Arabidopsis Sequence Match ( AT2G42380.1 )
(BLAST)

001: MAQLPPKIPN MTQHWPDFSS QKLSPFSTPT ATAVATATTT VQNPSWVDEF LDFSASRRGN HRRSISDSIA FLEAPTVSIE DHQFDRFDDE QFMSMFTDDD
101: NLHSNPSHIN NKNNNVGPTG SSSNTSTPSN SFNDDNKELP PSDHNMNNNI NNNYNDEVQS QCKMEPEDGT ASNNNSGDSS GNRILDPKRV KRILANRQSA
201: QRSRVRKLQY ISELELLSPR VAFLDHQRLL LNVDNSALKQ RIAALSQDKL FKDAHQEALK REIERLRQVY NQQSLTNVEN ANHLSATGAG ATPAVDIKSS
301: VETEQLLNVS

Arabidopsis Description

BZIP34Basic leucine zipper 34 [Source:UniProtKB/Swiss-Prot;Acc:F4IN23]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.