Factsheet for TraesCS1A01G186000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G191000.1	Wheat	nucleus, plastid	95.4	96.63
TraesCS1B01G193800.1	Wheat	nucleus	95.14	95.88
HORVU4Hr1G053410.2	Barley	cytosol	80.31	82.63
OQU92255	Sorghum	nucleus	59.85	76.72
Os10t0531900-01	Rice	nucleus	72.63	71.0
Zm00001d029711_P001	Maize	nucleus	71.61	70.53
TraesCS5A01G491600.1	Wheat	nucleus	44.25	67.58
VIT_18s0001g13740.t01	Wine grape	nucleus	21.48	63.64
TraesCS7A01G268700.1	Wheat	nucleus	49.1	41.11
GSMUA_Achr1P08090_001	Banana	nucleus, plastid	48.59	40.77
CDY15909	Canola	plastid	38.87	34.23
CDX99610	Canola	nucleus	38.11	33.71
Bra030314.1-P	Field mustard	plastid	39.64	33.7
PGSC0003DMT400009538	Potato	nucleus	37.6	33.11
TraesCS5A01G299400.1	Wheat	nucleus	31.71	32.89
Solyc04g081190.2.1	Tomato	nucleus	37.34	32.88
CDX82008	Canola	nucleus	31.2	32.8
Bra031172.1-P	Field mustard	nucleus	31.2	32.45
TraesCS5A01G124600.1	Wheat	nucleus	27.37	32.23
TraesCS2A01G352100.1	Wheat	nucleus	30.43	31.9
TraesCS4A01G209900.1	Wheat	nucleus	26.85	31.72
TraesCS4A01G135600.2	Wheat	nucleus	28.64	31.46
TraesCS7A01G266400.1	Wheat	nucleus	28.39	30.41
TraesCS2A01G105700.1	Wheat	nucleus, plastid	28.13	29.89
AT2G21230.3	Thale cress	nucleus	39.39	29.33
KRH61066	Soybean	nucleus, plastid	38.11	29.04
TraesCS5A01G143300.1	Wheat	nucleus	17.65	28.87
KRH05913	Soybean	nucleus	38.36	27.12
KRH17396	Soybean	nucleus	38.11	26.65
TraesCS3A01G293700.2	Wheat	nucleus	19.69	25.84
TraesCS2A01G140900.1	Wheat	nucleus	18.67	23.86
TraesCS5A01G308400.1	Wheat	nucleus	30.69	23.53
KRH51734	Soybean	nucleus	22.25	21.7
TraesCS3A01G131900.1	Wheat	nucleus	17.39	21.38
TraesCS4A01G204300.1	Wheat	nucleus	17.65	19.94
TraesCS6A01G203200.1	Wheat	nucleus	13.04	15.79

Protein Annotations

EnsemblPlants:TraesCS1A01G186000.1	EnsemblPlantsGene:TraesCS1A01G186000	Gene3D:1.20.5.170	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
InterPro:bZIP	ncoils:Coil	PANTHER:PTHR13690	PANTHER:PTHR13690:SF78	PFAM:PF00170	PFscan:PS50217
SEG:seg	SMART:SM00338	SUPFAM:SSF57959	TIGR:cd14703	MapMan:15.5.4.1	:

Description

No Description!

Coordinates

chr1A:+:337150194..337152229

Molecular Weight (calculated)

41891.0 Da

IEP (calculated)

6.517

GRAVY (calculated)

-0.728

Length

391 amino acids

Sequence
(BLAST)

001: MGTTNELMHR HVQAAAVPPL PASFAATSAR GMGSQPGQGG RQRAGLPPTP PSGAGSHSLH VADACMPMQD DSAPRKAHRR SCSDVPFGYF PPPSPKTESG
101: WGLPCAGGGG GGGGGDELFN AFMSMEGMDG LNSSDGDSRG SSMPPANGAD SSENESEDYS GVESQVFLWG EAGRKRNAAG EPAAAATRHA RSLSMDSLMG
201: KLSFSANGGE PSKFSLEFGS GEFTPAEMKR IMADEKLAEM ALADPKRVKR VLANRQSAAR SKERRMRYIA ELEHKVQILQ TEATTLSAQL THLQRDSSGL
301: ATHNNELKFR LQAMEQQAQL RDALNEALTG EVQRLKQSAT SERGGDAGSS SNLAQQMQLR CQNQMLEMHK QQQQQIPFYQ LEQPEQNGES N

Best Arabidopsis Sequence Match ( AT4G38900.3 )
(BLAST)

001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.