Factsheet for Zm00001d029711_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92255	Sorghum	nucleus	66.75	86.89
Os10t0531900-01	Rice	nucleus	75.57	75.0
TraesCS1D01G191000.1	Wheat	nucleus, plastid	70.78	72.8
TraesCS1B01G193800.1	Wheat	nucleus	71.03	72.68
TraesCS1A01G186000.1	Wheat	plastid	70.53	71.61
HORVU4Hr1G053410.2	Barley	cytosol	61.96	64.74
Zm00001d048455_P001	Maize	nucleus	54.41	64.09
VIT_18s0001g13740.t01	Wine grape	nucleus	21.16	63.64
Zm00001d027461_P001	Maize	plastid	60.45	56.34
Zm00001d052725_P001	Maize	nucleus	49.12	41.85
Zm00001d031723_P002	Maize	nucleus	48.61	41.51
GSMUA_Achr1P08090_001	Banana	nucleus, plastid	48.11	40.99
CDY15909	Canola	plastid	38.54	34.46
Zm00001d053162_P003	Maize	nucleus	29.22	34.32
Bra030314.1-P	Field mustard	plastid	39.55	34.13
Zm00001d021189_P001	Maize	nucleus	31.49	33.78
Bra031172.1-P	Field mustard	nucleus	31.99	33.78
Zm00001d006127_P003	Maize	nucleus	31.49	33.69
CDX82008	Canola	nucleus	31.49	33.6
CDX99610	Canola	nucleus	37.28	33.48
Zm00001d041920_P001	Maize	nucleus	26.7	33.02
Zm00001d004857_P001	Maize	nucleus	28.21	32.0
PGSC0003DMT400009538	Potato	nucleus	35.77	31.98
Solyc04g081190.2.1	Tomato	nucleus	35.52	31.76
Zm00001d029064_P001	Maize	nucleus	27.46	31.5
Zm00001d007172_P001	Maize	plastid	28.46	31.22
Zm00001d003180_P001	Maize	nucleus	28.97	31.17
Zm00001d047519_P001	Maize	nucleus	27.46	30.88
Zm00001d031697_P001	Maize	nucleus	19.14	30.52
Zm00001d022442_P001	Maize	nucleus	28.46	30.21
AT2G21230.3	Thale cress	nucleus	39.8	30.1
KRH61066	Soybean	nucleus, plastid	38.29	29.63
Zm00001d021191_P001	Maize	plastid	33.0	28.73
Zm00001d052717_P001	Maize	nucleus	27.46	28.46
Zm00001d043420_P001	Maize	nucleus	19.9	28.42
Zm00001d023507_P001	Maize	nucleus, plastid	28.46	28.39
KRH05913	Soybean	nucleus	39.29	28.21
KRH17396	Soybean	nucleus	39.29	27.91
Zm00001d012719_P001	Maize	nucleus	19.4	27.5
Zm00001d053442_P001	Maize	nucleus	17.63	27.13
Zm00001d016154_P001	Maize	nucleus	16.88	26.59
Zm00001d006157_P001	Maize	nucleus	31.49	26.1
Zm00001d039383_P001	Maize	nucleus	18.14	25.0
KRH51734	Soybean	nucleus	23.68	23.44
HORVU1Hr1G049310.2	Barley	nucleus	23.68	21.91
Zm00001d049135_P001	Maize	mitochondrion	16.37	18.62
Zm00001d041831_P001	Maize	mitochondrion	15.87	18.1
Zm00001d035240_P001	Maize	nucleus	10.08	17.7
Zm00001d016732_P003	Maize	nucleus	13.35	16.56
Zm00001d050669_P001	Maize	nucleus	13.1	16.15
Zm00001d007364_P001	Maize	nucleus	19.65	12.24

Protein Annotations

Gene3D:1.20.5.170	EntrezGene:100193071	MapMan:15.5.4.1	UniProt:B4FDP1	EMBL:BT035229	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	ProteinID:ONL99460.1	PFAM:PF00170	PFscan:PS50217
PANTHER:PTHR13690	PANTHER:PTHR13690:SF78	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI00017B652E	EnsemblPlantsGene:Zm00001d029711
EnsemblPlants:Zm00001d029711_P001	EnsemblPlants:Zm00001d029711_T001	InterPro:bZIP	SEG:seg	:	:

Description

bZIP-transcription factor 78Basic-leucine zipper (bZIP) transcription factor family protein

Coordinates

chr1:-:83544940..83547374

Molecular Weight (calculated)

42320.5 Da

IEP (calculated)

8.280

GRAVY (calculated)

-0.751

Length

397 amino acids

Sequence
(BLAST)

001: MNTTNGHGLM HHHHVQASMA PAQHQKQRPG LPPPAPAPAG AGSHSLHADM CVDDSSAPGR AQALGGLPPR KAHRRSRSDV VPYGYFQPLP PPSPSPKVEA
101: GGWGLASGGG GGAGDDLLNA YMSMEGMDGL NHSDGDSRGS SGMRTNGADS SENESEDYGA GADSQFFLWG DGGKRRRNAS GEPAAPPAAA AAAARHARSH
201: SMDSLMGKLS FSANGEPGKF SLDFGGGEFT PAEMKRIMAD EKLAEMALAD PKRVKRVLAN RQSAARSKER RMRYIAELEQ KVQILQTEAT TLSAQLTLLQ
301: RDSAGLATQN NELKFRLQAM EQQAQLRDAL NEALTGEVQR LKLGDTASSG NNLPQQVQLR CQNQVAGLHK QQQQQGGEQI PFYQLEQNGA PRNDAPK

Best Arabidopsis Sequence Match ( AT4G38900.3 )
(BLAST)

001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.