CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05913	Soybean	nucleus	92.84	93.85
KRH61066	Soybean	nucleus, plastid	64.58	70.37
KRH51734	Soybean	nucleus	47.05	65.59
VIT_18s0001g13740.t01	Wine grape	nucleus	13.77	58.33
HORVU3Hr1G109890.1	Barley	cytosol	6.08	54.84
Solyc04g081190.2.1	Tomato	nucleus	38.82	48.87
PGSC0003DMT400009538	Potato	nucleus	38.64	48.65
TraesCS5A01G491600.1	Wheat	nucleus	21.65	47.27
TraesCS4D01G316900.1	Wheat	nucleus	21.29	45.95
GSMUA_Achr5P20200_001	Banana	nucleus	22.72	45.68
KRH24356	Soybean	nucleus	43.83	44.71
KRH29330	Soybean	nucleus	44.01	44.17
CDY12108	Canola	nucleus	33.27	43.66
Zm00001d048455_P001	Maize	nucleus	26.12	43.32
CDX72732	Canola	nucleus	33.99	43.08
CDY22407	Canola	nucleus	33.81	42.47
GSMUA_Achr8P12090_001	Banana	nucleus	35.78	42.28
GSMUA_Achr3P12290_001	Banana	nucleus	37.75	42.2
Bra033582.1-P	Field mustard	nucleus	33.63	42.15
OQU92255	Sorghum	nucleus	22.9	41.97
Zm00001d027461_P001	Maize	plastid	31.84	41.78
CDX90298	Canola	nucleus	32.74	41.78
CDY15909	Canola	plastid	33.09	41.67
KXG40277	Sorghum	nucleus	32.02	41.53
Bra010722.1-P	Field mustard	nucleus	32.92	41.35
TraesCS7A01G268700.1	Wheat	nucleus	34.53	41.33
Os03t0127500-00	Rice	nucleus	31.48	41.31
GSMUA_Achr11P...	Banana	mitochondrion, nucleus	31.13	41.04
Os08t0543900-00	Rice	nucleus	33.99	40.95
TraesCS7D01G269300.1	Wheat	nucleus	34.53	40.8
Bra030314.1-P	Field mustard	plastid	33.45	40.65
Zm00001d031723_P002	Maize	nucleus	33.81	40.65
CDX99610	Canola	nucleus	31.84	40.27
Zm00001d052725_P001	Maize	nucleus	33.45	40.13
AT4G38900.1	Thale cress	nucleus	39.53	39.96
EES15257	Sorghum	nucleus	34.7	39.43
Zm00001d029711_P001	Maize	nucleus	27.91	39.29
TraesCS1D01G191000.1	Wheat	nucleus, plastid	27.01	39.12
TraesCS1B01G193800.1	Wheat	nucleus	27.01	38.92
TraesCS1A01G186000.1	Wheat	plastid	26.65	38.11
Os10t0531900-01	Rice	nucleus	27.19	38.0
AT2G21230.3	Thale cress	nucleus	35.42	37.71
TraesCS4B01G320400.1	Wheat	nucleus	26.12	36.5
GSMUA_Achr1P08090_001	Banana	nucleus, plastid	29.87	35.84
Bra031172.1-P	Field mustard	nucleus	23.79	35.37
CDX82008	Canola	nucleus	23.43	35.22
KRH72827	Soybean	plastid	22.54	34.62
KRH17183	Soybean	plastid	21.82	33.7
KRH30482	Soybean	nucleus	23.08	33.51
KRH70316	Soybean	nucleus	19.5	33.03
KRG98137	Soybean	nucleus	22.36	32.89
KRH29611	Soybean	nucleus	22.18	32.21
KRH10117	Soybean	nucleus	24.15	32.14
KRH64202	Soybean	nucleus	16.46	31.08
KRH24606	Soybean	nucleus	22.0	30.98
KRH23219	Soybean	nucleus	23.61	30.84
KRH27307	Soybean	plastid	13.77	27.02
KRH22014	Soybean	nucleus, plastid	15.38	26.88
KRH22317	Soybean	nucleus	14.85	26.69
KRH53733	Soybean	nucleus	8.23	26.14
KRH27013	Soybean	nucleus	14.67	25.62
KRH55826	Soybean	nucleus, plastid	15.38	25.29
KRH25692	Soybean	nucleus, plastid	14.85	25.15
KRH08713	Soybean	nucleus	18.43	24.18
KRH35159	Soybean	nucleus	13.42	23.66
KRH59143	Soybean	nucleus	15.21	22.67
KRH43037	Soybean	nucleus	15.03	22.34

Protein Annotations

Gene3D:1.20.5.170	EntrezGene:100787636	MapMan:15.5.4.1	EMBL:ACUP02009087	ncoils:Coil	EnsemblPlantsGene:GLYMA_14G217200
GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
UniProt:I1MC59	InterPro:IPR004827	EnsemblPlants:KRH17396	ProteinID:KRH17396	ProteinID:KRH17396.1	PFAM:PF00170
PFscan:PS50217	PANTHER:PTHR13690	PANTHER:PTHR13690:SF76	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000233BB31
InterPro:bZIP	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:48208521..48212397

Molecular Weight (calculated)

61405.2 Da

IEP (calculated)

6.932

GRAVY (calculated)

-0.818

Length

559 amino acids

Sequence
(BLAST)

001: MEGVDQSNMN RNSCVFGSSS SSSSGGALRP PNRLNSNVML INQMGVTENQ KPYGIPPSHP NTNISPSSAY PQFFASQSQS NSVSQRLSSP NLSPASSHSR
101: SLSQPSFFSL DSLPPLSPSP YKEPSFSDSI STDVSAEESL ANSHAPLPNR GHALQLGHSL PPRKGHRRSS SDSPLGIADF IQSVPQSVSS KTWSDRENLA
201: SRGGNSGFEK PIQLVLKEPM KDMDCVDGFG GEPMVGRKED DALDDLFSAY MNLDNIDGLN FSGMEDKDLD SRTSGSKTVE SSDNEVESHA YGKVIGAQGA
301: ISRCSEERRE GVKRSSNGDV APGSRHRRSF SLDSSIGNFH IGDELPKLPP SQNRFGQHSP SSSIDGKTSE TSMEFGNGEF SSEELKKIKE NDKLAEIAMA
401: DPKRAKRILA NRLSAARSKE RKMRYISELE LKVQTLQTET TTLSTQFTKL QMNNSELKSE NNEYKLRIQA LEQQSQLKDA LNETLDAEVR RLRCTVAELG
501: GESLLSSRMA QQLAISQQVF QLKEQQHPNQ LRHVQVHNTH SQEQTQTQSQ RHNGKATAY

Best Arabidopsis Sequence Match ( AT4G38900.3 )
(BLAST)

001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.