Factsheet for TraesCS4B01G320400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G316900.1	Wheat	nucleus	63.0	97.3
TraesCS5A01G491600.1	Wheat	nucleus	61.25	95.7
HORVU4Hr1G083000.1	Barley	nucleus	89.5	91.79
Zm00001d048455_P001	Maize	nucleus	52.5	62.31
KXG40277	Sorghum	nucleus	63.0	58.47
Os03t0127500-00	Rice	nucleus	62.0	58.22
Zm00001d027461_P001	Maize	plastid	61.75	57.98
TraesCS1B01G193800.1	Wheat	nucleus	55.5	57.22
VIT_18s0001g13740.t01	Wine grape	nucleus	18.75	56.82
GSMUA_Achr1P08090_001	Banana	nucleus, plastid	46.0	39.48
TraesCS5B01G124200.1	Wheat	nucleus	25.25	36.07
CDY15909	Canola	plastid	36.25	32.66
TraesCS4B01G169600.1	Wheat	nucleus	29.0	32.58
TraesCS4B01G113400.1	Wheat	nucleus	26.75	32.52
CDX99610	Canola	nucleus	35.75	32.35
PGSC0003DMT400009538	Potato	nucleus	35.5	31.98
Bra030314.1-P	Field mustard	plastid	36.75	31.96
Solyc04g081190.2.1	Tomato	nucleus	35.25	31.76
TraesCS5B01G301900.1	Wheat	nucleus	29.75	31.57
TraesCS2B01G122700.1	Wheat	nucleus	29.0	31.35
TraesCS7B01G166100.1	Wheat	nucleus	28.75	31.08
KRH61066	Soybean	nucleus, plastid	37.75	29.43
Bra031172.1-P	Field mustard	nucleus	27.5	29.26
CDX82008	Canola	nucleus	27.0	29.03
TraesCS5B01G142200.1	Wheat	nucleus	17.25	28.87
AT2G21230.3	Thale cress	nucleus	36.5	27.81
TraesCS3B01G328400.1	Wheat	nucleus	18.0	26.87
KRH05913	Soybean	nucleus	37.0	26.76
KRH17396	Soybean	nucleus	36.5	26.12
TraesCS5B01G308800.1	Wheat	plastid	26.75	22.91
TraesCS3B01G167500.1	Wheat	nucleus	16.5	22.6
TraesCS2B01G165700.1	Wheat	nucleus	17.0	22.15
KRH51734	Soybean	nucleus	21.5	21.45
TraesCS4B01G108000.1	Wheat	nucleus	15.0	17.34
TraesCS6B01G222800.1	Wheat	nucleus	12.0	14.86

Protein Annotations

EnsemblPlants:TraesCS4B01G320400.1	EnsemblPlantsGene:TraesCS4B01G320400	Gene3D:1.20.5.170	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
InterPro:bZIP	ncoils:Coil	PANTHER:PTHR13690	PANTHER:PTHR13690:SF88	PFAM:PF00170	PFscan:PS50217
SEG:seg	SMART:SM00338	SUPFAM:SSF57959	TIGR:cd14703	MapMan:15.5.4.1	:

Description

No Description!

Coordinates

chr4B:+:611852824..611854955

Molecular Weight (calculated)

42669.0 Da

IEP (calculated)

6.430

GRAVY (calculated)

-0.579

Length

400 amino acids

Sequence
(BLAST)

001: MERIGEAHQV HQLQQVQQQG VAAAPSFGVV EHSVVAAAAA AATKPRAPGL PPTPPASFAG QQRGAGGDVC MDDSSGAAGR KQVVPAHRRS RSEVPFAGYF
101: PPPTQQLPQP KAEAGGWGDG TGGDDLFSSY LNLEGMDVLN SSSPDSSAKA DSSENGDSEE CAAWGAGAGV KRSAAGEPAM AGRHARSLSV DSLMGRLNFA
201: SPGGGANGAG GMFSLEFGSG EFSPAEMKKI MADEKLTEMA LADPKRVKRV LANRQSAARS KERKMRYIVE LEQKVQILQT EATTLAAQIN LLQRDSSAVA
301: TQNNELRFRL QAMEQQAQLR DALNEALTGE VQRLKIAALE LGIGDSCSSN GMAQQHSLMF QHQQQQQQEA TPIPFYQLQH QQQQQLQQQN GTANKHESRE

Best Arabidopsis Sequence Match ( AT2G21230.1 )
(BLAST)

001: MGGGGDTTDT NMMQRVNSSS GTSSSSIPKH NLHLNPALIR SHHHFRHPFT GAPPPPIPPI SPYSQIPATL QPRHSRSMSQ PSSFFSFDSL PPLNPSAPSV
101: SVSVEEKTGA GFSPSLPPSP FTMCHSSSSR NAGDGENLPP RKSHRRSNSD VTFGFSSMMS QNQKSPPLSS LERSISGEDT SDWSNLVKKE PREGFYKGRK
201: PEVEAAMDDV FTAYMNLDNI DVLNSFGGED GKNGNENVEE MESSRGSGTK KTNGGSSSDS EGDSSASGNV KVALSSSSSG VKRRAGGDIA PTGRHYRSVS
301: MDSCFMGKLN FGDESSLKLP PSSSAKVSPT NSGEGNSSAY SVEFGNSEFT AAEMKKIAAD EKLAEIVMAD PKRVKRILAN RVSAARSKER KTRYMAELEH
401: KVQTLQTEAT TLSAQLTHLQ RDSMGLTNQN SELKFRLQAM EQQAQLRDAL SEKLNEEVQR LKLVIGEPNR RQSGSSSSES KMSLNPEMFQ QLSISQLQHQ
501: QMQHSNQCST MKAKHTSND

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:B3H7M2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.