Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G491600.1 | Wheat | nucleus | 93.44 | 94.53 |
| TraesCS4B01G320400.1 | Wheat | nucleus | 97.3 | 63.0 |
| HORVU4Hr1G083000.1 | Barley | nucleus | 91.12 | 60.51 |
| VIT_18s0001g13740.t01 | Wine grape | nucleus | 28.96 | 56.82 |
| Zm00001d048455_P001 | Maize | nucleus | 64.09 | 49.26 |
| TraesCS1D01G191000.1 | Wheat | nucleus, plastid | 66.8 | 44.82 |
| KXG40277 | Sorghum | nucleus | 72.97 | 43.85 |
| Os03t0127500-00 | Rice | nucleus | 71.43 | 43.43 |
| Zm00001d027461_P001 | Maize | plastid | 69.5 | 42.25 |
| GSMUA_Achr1P08090_001 | Banana | nucleus, plastid | 55.21 | 30.69 |
| TraesCS7D01G269300.1 | Wheat | nucleus | 55.21 | 30.23 |
| TraesCS4D01G110900.1 | Wheat | nucleus | 37.07 | 29.09 |
| TraesCS5D01G132300.1 | Wheat | nucleus | 36.68 | 28.61 |
| CDY15909 | Canola | plastid | 46.33 | 27.03 |
| PGSC0003DMT400009538 | Potato | nucleus | 46.33 | 27.03 |
| Solyc04g081190.2.1 | Tomato | nucleus | 45.95 | 26.8 |
| TraesCS4D01G171700.2 | Wheat | nucleus | 36.68 | 26.69 |
| CDX99610 | Canola | nucleus | 44.79 | 26.24 |
| Bra030314.1-P | Field mustard | plastid | 45.95 | 25.87 |
| TraesCS5D01G308600.1 | Wheat | nucleus | 37.45 | 25.8 |
| TraesCS2D01G105400.1 | Wheat | nucleus | 35.91 | 25.27 |
| KRH61066 | Soybean | nucleus, plastid | 49.03 | 24.76 |
| TraesCS7D01G268400.1 | Wheat | nucleus | 34.75 | 24.46 |
| CDX82008 | Canola | nucleus | 34.75 | 24.19 |
| Bra031172.1-P | Field mustard | nucleus | 34.75 | 23.94 |
| AT2G21230.3 | Thale cress | nucleus | 45.56 | 22.48 |
| KRH05913 | Soybean | nucleus | 46.72 | 21.88 |
| KRH17396 | Soybean | nucleus | 45.95 | 21.29 |
| TraesCS5D01G148700.1 | Wheat | nucleus | 18.92 | 20.5 |
| TraesCS5D01G315400.1 | Wheat | plastid | 35.52 | 19.7 |
| TraesCS3D01G293500.1 | Wheat | nucleus | 20.08 | 19.4 |
| TraesCS3D01G148200.1 | Wheat | nucleus | 20.08 | 17.05 |
| TraesCS2D01G144300.1 | Wheat | nucleus | 20.08 | 16.99 |
| KRH51734 | Soybean | nucleus | 24.32 | 15.71 |
| TraesCS4D01G105100.1 | Wheat | mitochondrion | 15.44 | 11.56 |
| TraesCS6D01G187300.1 | Wheat | nucleus | 13.51 | 10.84 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G316900.1 | EnsemblPlantsGene:TraesCS4D01G316900 | Gene3D:1.20.5.170 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| InterPro:bZIP | ncoils:Coil | PANTHER:PTHR13690 | PANTHER:PTHR13690:SF88 | PFAM:PF00170 | PFscan:PS50217 |
| SEG:seg | SMART:SM00338 | SUPFAM:SSF57959 | TIGR:cd14703 | MapMan:15.5.4.1 | : |
Description
No Description!
Coordinates
chr4D:+:482158333..482160000
Molecular Weight (calculated)
28060.0 Da
IEP (calculated)
6.685
GRAVY (calculated)
-0.569
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVLNSSSPD SSAKADSSEN GDSEECAAWG AGAGVKRSAA GEPAMAGRHA RSLSVDSLMG RLNFASPGGA ANGAGGMFSL EFGSGEFSPA EMKKIMADEK
101: LAEMALADPK RVKRVLANRQ SAARSKERKM RYIVELEQKV QILQTEATTL AAQINLLQRD SSAVATQNNE LRFRLQAMEQ QAQLRDALND ALTGEVQRLK
201: IAAVELGIGD SCSSNAMAQQ HNLMFQHQQL QATPIPFYQL QHQQQQQQNG TANKHESRE
101: LAEMALADPK RVKRVLANRQ SAARSKERKM RYIVELEQKV QILQTEATTL AAQINLLQRD SSAVATQNNE LRFRLQAMEQ QAQLRDALND ALTGEVQRLK
201: IAAVELGIGD SCSSNAMAQQ HNLMFQHQQL QATPIPFYQL QHQQQQQQNG TANKHESRE
001: MGGGGDTTDT NMMQRVNSSS GTSSSSIPKH NLHLNPALIR SHHHFRHPFT GAPPPPIPPI SPYSQIPATL QPRHSRSMSQ PSSFFSFDSL PPLNPSAPSV
101: SVSVEEKTGA GFSPSLPPSP FTMCHSSSSR NAGDGENLPP RKSHRRSNSD VTFGFSSMMS QNQKSPPLSS LERSISGEDT SDWSNLVKKE PREGFYKGRK
201: PEVEAAMDDV FTAYMNLDNI DVLNSFGGED GKNGNENVEE MESSRGSGTK KTNGGSSSDS EGDSSASGNV KVALSSSSSG VKRRAGGDIA PTGRHYRSVS
301: MDSCFMGKLN FGDESSLKLP PSSSAKVSPT NSGEGNSSAY SVEFGNSEFT AAEMKKIAAD EKLAEIVMAD PKRVKRILAN RVSAARSKER KTRYMAELEH
401: KVQTLQTEAT TLSAQLTHLQ RDSMGLTNQN SELKFRLQAM EQQAQLRDAL SEKLNEEVQR LKLVIGEPNR RQSGSSSSES KMSLNPEMFQ QLSISQLQHQ
501: QMQHSNQCST MKAKHTSND
101: SVSVEEKTGA GFSPSLPPSP FTMCHSSSSR NAGDGENLPP RKSHRRSNSD VTFGFSSMMS QNQKSPPLSS LERSISGEDT SDWSNLVKKE PREGFYKGRK
201: PEVEAAMDDV FTAYMNLDNI DVLNSFGGED GKNGNENVEE MESSRGSGTK KTNGGSSSDS EGDSSASGNV KVALSSSSSG VKRRAGGDIA PTGRHYRSVS
301: MDSCFMGKLN FGDESSLKLP PSSSAKVSPT NSGEGNSSAY SVEFGNSEFT AAEMKKIAAD EKLAEIVMAD PKRVKRILAN RVSAARSKER KTRYMAELEH
401: KVQTLQTEAT TLSAQLTHLQ RDSMGLTNQN SELKFRLQAM EQQAQLRDAL SEKLNEEVQR LKLVIGEPNR RQSGSSSSES KMSLNPEMFQ QLSISQLQHQ
501: QMQHSNQCST MKAKHTSND
Arabidopsis Description
Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:B3H7M2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.