Factsheet for TraesCS5D01G315400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G308800.1	Wheat	plastid	95.07	95.07
TraesCS5A01G308400.1	Wheat	nucleus	96.15	88.04
HORVU5Hr1G080140.1	Barley	nucleus, plastid	86.08	87.2
Zm00001d021191_P001	Maize	plastid	42.18	43.2
Zm00001d006157_P001	Maize	nucleus	43.47	42.38
EER97061	Sorghum	nucleus	42.83	40.0
Os04t0181300-00	Rice	nucleus	35.55	38.97
TraesCS7D01G269300.1	Wheat	nucleus	38.12	37.63
TraesCS4D01G316900.1	Wheat	nucleus	19.7	35.52
TraesCS1D01G191000.1	Wheat	nucleus, plastid	25.91	31.35
AT2G13150.1	Thale cress	plastid	15.63	27.86
TraesCS4D01G110900.1	Wheat	nucleus	17.99	25.45
TraesCS2D01G105400.1	Wheat	nucleus	19.91	25.27
AT2G12900.1	Thale cress	plastid	14.13	25.0
TraesCS4D01G171700.2	Wheat	nucleus	18.84	24.72
AT2G12940.1	Thale cress	plastid	15.42	24.49
TraesCS5D01G132300.1	Wheat	nucleus	17.34	24.4
TraesCS5D01G148700.1	Wheat	nucleus	12.42	24.27
TraesCS7D01G268400.1	Wheat	nucleus	19.06	24.18
TraesCS5D01G308600.1	Wheat	nucleus	19.27	23.94
Os09t0520400-01	Rice	nucleus	22.27	23.32
TraesCS3D01G293500.1	Wheat	nucleus	13.28	23.13
TraesCS2D01G144300.1	Wheat	nucleus	14.56	22.22
TraesCS3D01G148200.1	Wheat	nucleus	13.7	20.98
CDX82009	Canola	plastid	15.85	19.32
CDY70502	Canola	nucleus	15.85	19.17
CDY13828	Canola	plastid	15.63	18.86
Bra031173.1-P	Field mustard	plastid	15.63	18.86
TraesCS4D01G105100.1	Wheat	mitochondrion	12.85	17.34
TraesCS6D01G187300.1	Wheat	nucleus	10.28	14.86

Protein Annotations

EnsemblPlants:TraesCS5D01G315400.1	EnsemblPlantsGene:TraesCS5D01G315400	Gene3D:1.20.5.170	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
InterPro:bZIP	ncoils:Coil	PANTHER:PTHR13690	PANTHER:PTHR13690:SF76	PFAM:PF00170	PFscan:PS50217
SEG:seg	SMART:SM00338	SUPFAM:SSF57959	TIGR:cd14703	MapMan:15.5.4.1	:

Description

No Description!

Coordinates

chr5D:+:409876230..409878691

Molecular Weight (calculated)

49683.0 Da

IEP (calculated)

10.270

GRAVY (calculated)

-0.509

Length

467 amino acids

Sequence
(BLAST)

001: MRVRPLIPSP PTSHPAAADL SSSLHRLPPS LRLPPAHPAS VADRFVPGFG YYRVPPPPPP PLPPAASGGA GSHHSRSLSQ PQFFSMDFLF RPPYPDPSAP
101: AAIALSPPPP PPPSGSDRGA SGLPPPLGSE RGASGLPPLR AGHQRSQSDV PLAFSSQPNL PMPPPAPVNA EALVAANNST LDGILGAYNK STNGLGAVGS
201: SGLVGQERRD QLDSQAPAWS PGDSSENEAE SADGSLPRHC RSLSADSLVG KFKFGPSGLE PSNSNSNLPP PSPGPGAAGR LARSGSGSIG GAAALFAKEF
301: ANSKEFSEAE KKVIMDSEHL AQIVLTDPKR VRRILNNRLS AAKSKERKAK YIVELEGKVQ VLQGETMNLS AQVKMIKKGQ ARLSIHNHEM RIRLQALEEQ
401: AQLKEALNEA LHAEVERLNL VVAEAINPHM PNSSEQRMSS QMIQLHQLQI LRQPSQLQQG QQRQRNF

Best Arabidopsis Sequence Match ( AT4G38900.1 )
(BLAST)

001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: NDPLFRILAN RQSAARSKER KMRYIVELEH KVQTLQTEAT TLSAQLTLLQ RDMMGLTNQN NELKFRLQAM EQQARLRDAL NEALNGEVQR LKLAIGESSQ
501: NESERSKMQS LNAEMFQQLN ISQLRQQPQQ MQQQSHQQNH QNGTMATKSE SNE

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.