Factsheet for Bra010722.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90298	Canola	nucleus	96.85	98.4
CDY12108	Canola	nucleus	85.39	89.2
Bra033582.1-P	Field mustard	nucleus	72.13	71.97
AT4G38900.1	Thale cress	nucleus	78.2	62.93
VIT_18s0001g13740.t01	Wine grape	nucleus	17.75	59.85
Bra030314.1-P	Field mustard	plastid	47.19	45.65
Bra031172.1-P	Field mustard	nucleus	34.38	40.69
Solyc04g081190.2.1	Tomato	nucleus	38.43	38.51
PGSC0003DMT400009538	Potato	nucleus	38.43	38.51
Bra034916.1-P	Field mustard	nucleus, plastid	21.35	36.12
KRH61066	Soybean	nucleus, plastid	41.35	35.87
KRH05913	Soybean	nucleus	42.7	34.36
Bra016980.1-P	Field mustard	nucleus	26.07	33.92
KRH17396	Soybean	nucleus	41.35	32.92
Bra004582.1-P	Field mustard	nucleus	26.29	32.87
Bra030637.1-P	Field mustard	nucleus	27.87	32.55
Bra030663.1-P	Field mustard	nucleus	23.37	32.5
Bra031541.1-P	Field mustard	nucleus	23.15	31.79
KRH51734	Soybean	nucleus	27.87	30.92
Bra021735.1-P	Field mustard	nucleus	23.37	30.68
Bra015471.1-P	Field mustard	nucleus	26.74	30.36
Bra032191.1-P	Field mustard	nucleus	22.47	30.3
Bra018250.1-P	Field mustard	nucleus	25.17	29.95
Bra000195.1-P	Field mustard	nucleus	21.12	28.14
Bra035464.1-P	Field mustard	nucleus	9.44	23.86
Bra031173.1-P	Field mustard	plastid	20.22	23.26
Bra004689.1-P	Field mustard	nucleus, plastid	15.28	22.22
Bra003320.1-P	Field mustard	nucleus	14.61	21.38
Bra007380.1-P	Field mustard	nucleus	14.61	20.44
Bra000256.1-P	Field mustard	nucleus, plastid	14.38	17.68
Bra027885.1-P	Field mustard	nucleus	13.93	16.62
Bra034913.1-P	Field mustard	nucleus	8.09	16.22
Bra009426.1-P	Field mustard	mitochondrion, nucleus	10.56	15.31

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra010722	EnsemblPlants:Bra010722.1	EnsemblPlants:Bra010722.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	UniProt:M4D2L9	PFAM:PF07716	PFscan:PS50217
PANTHER:PTHR13690	PANTHER:PTHR13690:SF76	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0002546B49	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

AT4G38900 (E=8e-131) | bZIP protein

Coordinates

chrA08:+:16115352..16116932

Molecular Weight (calculated)

49394.2 Da

IEP (calculated)

6.617

GRAVY (calculated)

-0.989

Length

445 amino acids

Sequence
(BLAST)

001: MGDTDTDMIH RLHSPFGKQP QQLQFSSDSA KRVGVPPTSP YSQIPTTRPQ PQGASHSRSI SQPSSFFSFD SLPPLSPSPS NNNNNNNNQP SSLLPPPPFT
101: RCNSDSSRVV LPPRKFHRRS NSDIPTSIPP RPLERGESPD WSNHTPPFVK KESGEDMDDL FSAYMNLENI DALNSSEADD NNSKNGESSR ASGTKTNGSD
201: DTEGESSSVN YESGGDRNNS LKRRAGGEGD IAPTTRHYRS VSVDSCFMEK MSFGEDSLKP PPTNSVDGGI EFKSGEFNAA EMKKIMANDK LAEMAVSDPK
301: RVKRILANRQ SAARSKERKM RYILELEHKV QTLQTEATTL SAQFTLLQRD MMGLTNQNNE LKFRLQSMEQ QAQLRDALSE ALNGEVQRLK LAIGETSHNE
401: SDRSKMQSLN AEMFQQLHIS QLTQQPQSQQ NRNGTMSAKP ESNEL

Best Arabidopsis Sequence Match ( AT4G38900.3 )
(BLAST)

001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.