Factsheet for Bra003320.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra003320.1-P
Bra006595.1-P
Bra007380.1-P
Bra018296.1-P
Bra032191.1-P
Bra033467.1-P
Bra034916.1-P
Bra039723.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G58120.1	Bra032191.1-P	AT1G43700.1	17719007
AT3G58120.1	Bra034916.1-P	AT1G43700.1	17719007
AT3G58120.1	Bra000214.1-P	AT2G41090.1	17360592
AT3G58120.1	Bra000214.1-P	AT2G41100.1	17360592
AT3G58120.1	Bra018296.1-P	AT3G51920.1	17360592
AT3G58120.1	Bra033467.1-P	AT3G51920.1	17360592
AT3G58120.1	Bra003320.1-P	AT3G58120.1	17719007
AT3G58120.1	Bra007380.1-P	AT3G58120.1	17719007
AT3G58120.1	Bra039723.1-P	AT4G14640.1	17360592
AT3G58120.1	Bra002368.1-P	AT5G21274.1	17360592
AT3G58120.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98266	Canola	nucleus, plastid	93.42	95.3
Bra007380.1-P	Field mustard	nucleus	90.46	86.48
AT3G58120.1	Thale cress	nucleus	88.82	82.07
Bra004689.1-P	Field mustard	nucleus, plastid	67.76	67.32
KRH22317	Soybean	nucleus	62.17	60.77
VIT_12s0028g02590.t01	Wine grape	nucleus, plastid	58.22	60.0
KRH27013	Soybean	nucleus	62.17	59.06
PGSC0003DMT400024289	Potato	nucleus	55.92	56.11
KRH25692	Soybean	nucleus, plastid	60.53	55.76
KRH55826	Soybean	nucleus, plastid	61.51	55.0
Solyc12g010800.1.1	Tomato	nucleus	53.29	52.94
PGSC0003DMT400020206	Potato	nucleus	52.63	52.46
Bra000256.1-P	Field mustard	nucleus, plastid	62.17	52.21
Solyc07g053450.2.1	Tomato	nucleus	48.03	51.41
Bra035464.1-P	Field mustard	nucleus	18.42	31.82
Bra034913.1-P	Field mustard	nucleus	15.79	21.62
Bra034916.1-P	Field mustard	nucleus, plastid	17.76	20.53
Bra009426.1-P	Field mustard	mitochondrion, nucleus	20.72	20.52
Bra031541.1-P	Field mustard	nucleus	21.05	19.75
Bra030663.1-P	Field mustard	nucleus	20.72	19.69
Bra027885.1-P	Field mustard	nucleus	24.01	19.57
Bra030637.1-P	Field mustard	nucleus	23.68	18.9
Bra021735.1-P	Field mustard	nucleus	20.39	18.29
Bra032191.1-P	Field mustard	nucleus	19.74	18.18
Bra016980.1-P	Field mustard	nucleus	20.07	17.84
Bra018250.1-P	Field mustard	nucleus	21.71	17.65
Bra004582.1-P	Field mustard	nucleus	20.39	17.42
Bra015471.1-P	Field mustard	nucleus	22.04	17.09
Bra033582.1-P	Field mustard	nucleus	22.37	15.25
Bra000195.1-P	Field mustard	nucleus	16.45	14.97
Bra031172.1-P	Field mustard	nucleus	18.42	14.89
Bra010722.1-P	Field mustard	nucleus	21.38	14.61
Bra030314.1-P	Field mustard	plastid	21.05	13.91
Bra031173.1-P	Field mustard	plastid	17.43	13.7

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra003320	EnsemblPlants:Bra003320.1	EnsemblPlants:Bra003320.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
UniProt:M4CGI7	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR13301	PANTHER:PTHR13301:SF134
SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000254162B	InterPro:bZIP	SEG:seg	:

Description

AT2G42380 (E=4e-093) ATBZIP34, BZIP34 | bZIP transcription factor family protein

Coordinates

chrA07:-:12585129..12586886

Molecular Weight (calculated)

34096.1 Da

IEP (calculated)

6.450

GRAVY (calculated)

-0.975

Length

304 amino acids

Sequence
(BLAST)

001: MTTTTPHWPD FSSQKLPSIA ATAAATAGQQ NPSWMDEFLD FSTTRRGTHR RSISDSIAFL ETPSSGVGSH HFDRFDDEQF MSMFNDDVHQ NHNNQHSNNV
101: GPTRSSSNTS TPSSDDDNKE PLSTDHNHMD TTPIPSNVAG NDNNETDEVQ SQCKTEPQDG PSLNQDSGGS SGNRIHDPKR VKRILANRQS AQRSRVRKLQ
201: YISELERSVT SLQTEVSVLS PRVAFLDHQR LLLNVDNSAI KQRIAALAQD KIFKDAHQEA LKREIERLRQ VYHQQSLKKM ENNVSDQSPA DIKPSVEKEQ
301: LLNA

Best Arabidopsis Sequence Match ( AT3G58120.1 )
(BLAST)

001: MAQLPPKIPT MTTPNWPDFS SQKLPSIAAT AAAAATAGPQ QQNPSWMDEF LDFSATRRGT HRRSISDSIA FLEPPSSGVG NHHFDRFDDE QFMSMFNDDV
101: HNNNHNHHHH HSINGNVGPT RSSSNTSTPS DHNSLSDDDN NKEAPPSDHD HHMDNNVANQ NNAAGNNYNE SDEVQSQCKT EPQDGPSANQ NSGGSSGNRI
201: HDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQTE VSVLSPRVAF LDHQRLLLNV DNSAIKQRIA ALAQDKIFKD AHQEALKREI ERLRQVYHQQ
301: SLKKMENNVS DQSPADIKPS VEKEQLLNV

Arabidopsis Description

BZIP61BZIP61 [Source:UniProtKB/TrEMBL;Acc:A0A178VLL5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.