CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64202	Soybean	nucleus	86.93	51.69
PGSC0003DMT400042946	Potato	plastid	53.41	29.01
VIT_13s0067g02900.t01	Wine grape	nucleus	53.41	26.18
Solyc06g049040.2.1	Tomato	nucleus	48.86	25.98
Solyc06g048630.2.1	Tomato	nucleus	50.57	25.5
PGSC0003DMT400070968	Potato	nucleus	50.57	25.5
Bra016980.1-P	Field mustard	nucleus	47.73	24.56
CDX93167	Canola	nucleus	47.73	24.49
KRH17183	Soybean	plastid	49.43	24.03
CDY23889	Canola	nucleus	48.3	23.94
KRH72827	Soybean	plastid	49.43	23.9
CDY06974	Canola	nucleus	47.73	23.86
Bra004582.1-P	Field mustard	nucleus	47.73	23.6
CDX79976	Canola	nucleus	47.73	23.6
AT2G40620.1	Thale cress	nucleus	48.3	23.16
KRG98137	Soybean	nucleus	46.59	21.58
KRH30482	Soybean	nucleus	47.16	21.56
KRH70316	Soybean	nucleus	33.52	17.88
KRH29611	Soybean	nucleus	34.66	15.84
KRH24606	Soybean	nucleus	33.52	14.86
KRH10117	Soybean	nucleus	34.66	14.52
KRH23219	Soybean	nucleus	34.66	14.25
KRH08713	Soybean	nucleus	31.82	13.15
KRH35159	Soybean	nucleus	21.59	11.99
KRH61066	Soybean	nucleus, plastid	29.55	10.14
KRH24356	Soybean	nucleus	31.25	10.04
KRH29330	Soybean	nucleus	31.25	9.87
KRH55826	Soybean	nucleus, plastid	18.75	9.71
KRH25692	Soybean	nucleus, plastid	18.18	9.7
KRH22014	Soybean	nucleus, plastid	17.05	9.38
KRH22317	Soybean	nucleus	16.48	9.32
KRH27013	Soybean	nucleus	16.48	9.06
KRH59143	Soybean	nucleus	18.18	8.53
KRH43037	Soybean	nucleus	18.18	8.51
KRH27307	Soybean	plastid	13.64	8.42
KRH05913	Soybean	nucleus	26.14	8.32
KRH17396	Soybean	nucleus	26.14	8.23
KRH51734	Soybean	nucleus	14.2	6.23

Protein Annotations

MapMan:35.2	EMBL:ACUP02003480	ncoils:Coil	EnsemblPlantsGene:GLYMA_06G143200	GO:GO:0003674	GO:GO:0003700
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	UniProt:K7KV16	EnsemblPlants:KRH53733
ProteinID:KRH53733	ProteinID:KRH53733.1	PANTHER:PTHR13690	PANTHER:PTHR13690:SF82	UniParc:UPI000295FC42	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:11652004..11655116

Molecular Weight (calculated)

19718.1 Da

IEP (calculated)

4.719

GRAVY (calculated)

-0.543

Length

176 amino acids

Sequence
(BLAST)

001: MSFSHHRRSQ SEMHFRIPND FDLEVDLSPP HHFQDPVPSN SPDASSSSLV DAIDAEKALS PYKLAQLWTV DPKRAKRYRD TTGLTTENTE LKLRLQGMEQ
101: QANLCDALKN EVDRLKIATG EIVMHTDAYD IPYDLSEMLS SESIGQFQGL DIGNGVSHNL MPDCPSICVN NINNAF

Best Arabidopsis Sequence Match ( AT2G40620.1 )
(BLAST)

001: MEDPSNPQPN QSNLSQCPPL ATAPTPAPVR GPYHRRAHSE VQFRLPEDLD LSEPFGGFDE LGSEDDLFCS YMDIEKLGSG SGSASDSAGP SAPRSDNPFS
101: AENGGAEAGN SRPRHRHSLS VDGSSTLESI EAKKAMAPDK LAELWVVDPK RAKRIIANRQ SAARSKERKA RYILELERKV QTLQTEATTL SAQLSLFQRD
201: TTGLSSENTE LKLRLQVMEQ QAKLRDALNE QLKKEVERLK FATGEVSPAD AYNLGMAHMQ YQQQPQQSFF QHHHQQQTDA QNLQQMTHQF HLFQPNNNQN
301: QSSRTNPPTA HQLMHHATSN APAQSHSYSE AMHEDHLGRL QGLDISSCGR GSNFGRSDTV SESSSTM

Arabidopsis Description

BZIP18bZIP transcription factor 18 [Source:UniProtKB/Swiss-Prot;Acc:O22873]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.