Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G43700.1 | KRH08713 | AT1G43700.1 | 15824315 |
| AT1G43700.1 | KRH70316 | AT1G43700.1 | 15824315 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70316 | Soybean | nucleus | 65.96 | 85.15 |
| PGSC0003DMT400074878 | Potato | mitochondrion, nucleus | 32.16 | 52.49 |
| Solyc06g060490.2.1 | Tomato | nucleus | 33.57 | 51.62 |
| GSMUA_Achr3P19170_001 | Banana | nucleus | 24.18 | 51.5 |
| CDY48943 | Canola | nucleus | 27.7 | 48.96 |
| VIT_18s0076g00330.t01 | Wine grape | nucleus | 39.67 | 48.29 |
| PGSC0003DMT400002100 | Potato | nucleus | 38.5 | 48.24 |
| PGSC0003DMT400045314 | Potato | nucleus | 36.85 | 48.16 |
| Solyc04g071160.2.1 | Tomato | nucleus | 38.26 | 47.8 |
| Os11t0160500-01 | Rice | nucleus, plasma membrane | 26.29 | 47.46 |
| TraesCS5B01G124200.1 | Wheat | nucleus | 30.99 | 47.14 |
| Bra034916.1-P | Field mustard | nucleus, plastid | 28.87 | 46.77 |
| GSMUA_Achr6P18130_001 | Banana | nucleus | 32.16 | 46.76 |
| CDY30752 | Canola | nucleus | 36.15 | 46.67 |
| Bra032191.1-P | Field mustard | nucleus | 36.15 | 46.67 |
| CDY71925 | Canola | nucleus | 27.46 | 46.06 |
| CDX80722 | Canola | nucleus | 34.74 | 45.96 |
| EES08023 | Sorghum | nucleus | 36.38 | 45.59 |
| HORVU4Hr1G020540.1 | Barley | nucleus | 34.51 | 45.51 |
| Zm00001d041920_P001 | Maize | nucleus | 34.27 | 45.48 |
| Zm00001d053162_P003 | Maize | nucleus | 35.92 | 45.27 |
| TraesCS4B01G113400.1 | Wheat | nucleus | 34.51 | 44.68 |
| AT1G43700.1 | Thale cress | nucleus | 35.68 | 44.57 |
| TraesCS4D01G110900.1 | Wheat | nucleus | 34.51 | 44.55 |
| TraesCS4A01G209900.1 | Wheat | nucleus | 34.51 | 44.41 |
| Os12t0162500-01 | Rice | plasma membrane | 34.04 | 44.21 |
| EES15709 | Sorghum | nucleus | 36.15 | 44.13 |
| GSMUA_Achr10P... | Banana | nucleus | 31.92 | 43.45 |
| TraesCS5D01G132300.1 | Wheat | nucleus | 33.57 | 43.07 |
| TraesCS5A01G124600.1 | Wheat | nucleus | 33.33 | 42.77 |
| Zm00001d004857_P001 | Maize | nucleus | 34.98 | 42.57 |
| GSMUA_Achr10P... | Banana | nucleus | 33.33 | 42.26 |
| HORVU5Hr1G039870.5 | Barley | nucleus, plastid | 34.51 | 41.18 |
| GSMUA_Achr6P13040_001 | Banana | nucleus | 27.23 | 40.85 |
| Zm00001d023507_P001 | Maize | nucleus, plastid | 37.79 | 40.45 |
| KRH64202 | Soybean | nucleus | 23.47 | 33.78 |
| KRH17183 | Soybean | plastid | 28.4 | 33.43 |
| KRH72827 | Soybean | plastid | 27.93 | 32.69 |
| KRH53733 | Soybean | nucleus | 13.15 | 31.82 |
| KRH29611 | Soybean | nucleus | 27.7 | 30.65 |
| KRG98137 | Soybean | nucleus | 27.0 | 30.26 |
| KRH30482 | Soybean | nucleus | 27.0 | 29.87 |
| KRH24606 | Soybean | nucleus | 27.46 | 29.47 |
| KRH10117 | Soybean | nucleus | 28.17 | 28.57 |
| KRH23219 | Soybean | nucleus | 28.4 | 28.27 |
| KRH35159 | Soybean | nucleus | 20.42 | 27.44 |
| KRH27307 | Soybean | plastid | 15.73 | 23.51 |
| KRH22014 | Soybean | nucleus, plastid | 17.61 | 23.44 |
| KRH24356 | Soybean | nucleus | 28.64 | 22.26 |
| KRH29330 | Soybean | nucleus | 28.87 | 22.08 |
| KRH22317 | Soybean | nucleus | 15.26 | 20.9 |
| KRH61066 | Soybean | nucleus, plastid | 25.12 | 20.86 |
| KRH25692 | Soybean | nucleus, plastid | 15.96 | 20.61 |
| KRH55826 | Soybean | nucleus, plastid | 16.43 | 20.59 |
| KRH27013 | Soybean | nucleus | 15.26 | 20.31 |
| KRH05913 | Soybean | nucleus | 24.65 | 18.99 |
| KRH17396 | Soybean | nucleus | 24.18 | 18.43 |
| KRH59143 | Soybean | nucleus | 15.73 | 17.87 |
| KRH43037 | Soybean | nucleus | 15.49 | 17.55 |
| KRH51734 | Soybean | nucleus | 14.32 | 15.21 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:100101886 | MapMan:15.5.4.1 | EMBL:ACUP02010200 | ncoils:Coil | EnsemblPlantsGene:GLYMA_16G168400 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | UniProt:K7MHS5 | EnsemblPlants:KRH08713 |
| ProteinID:KRH08713 | ProteinID:KRH08713.1 | PFAM:PF00170 | PFscan:PS50217 | PANTHER:PTHR13690 | PANTHER:PTHR13690:SF86 |
| SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000295A489 | InterPro:bZIP | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr16:+:32835788..32840399
Molecular Weight (calculated)
47482.4 Da
IEP (calculated)
10.339
GRAVY (calculated)
-0.662
Length
426 amino acids
Sequence
(BLAST)
(BLAST)
001: MMHFFTIGYT QLPSTFCSLK SIFFFASTCS SANSHNHLKT ESQPSLLLLL SLSLWYHHSS PHKRKKKEER TNKPFFFKRK KERKGKIKFF FFFFSFSMDP
101: KFIGKPLAMV DLDRDRMSER GSHHRRSHSD TSFRFAANFD ELLLFDPSDL DISGLPSPLP LPSQGAGGVV PMSVVSEESG GRPRRSGASA GGHLRSLSVD
201: SDFFDGLGSG VGGDERGAGN GGGERHSNSM EGSSTTSFEA DSATMMDGMK KATAPDKLAE LALTDPKRAK RMLANRQSAA RSKERKIRYT SELEKKVQTL
301: QTEATNLSAQ LTMLQRDTTD LTAQNKELKL RLQAFEQEAQ LREDLNEALK KELQRLRVQS ACWGAMTGGN PSFGGIFNQL ASQLAMQQLS NSVPHQHQTQ
401: HQPQVGMPPP PSGQKHPKFM DFNQQK
101: KFIGKPLAMV DLDRDRMSER GSHHRRSHSD TSFRFAANFD ELLLFDPSDL DISGLPSPLP LPSQGAGGVV PMSVVSEESG GRPRRSGASA GGHLRSLSVD
201: SDFFDGLGSG VGGDERGAGN GGGERHSNSM EGSSTTSFEA DSATMMDGMK KATAPDKLAE LALTDPKRAK RMLANRQSAA RSKERKIRYT SELEKKVQTL
301: QTEATNLSAQ LTMLQRDTTD LTAQNKELKL RLQAFEQEAQ LREDLNEALK KELQRLRVQS ACWGAMTGGN PSFGGIFNQL ASQLAMQQLS NSVPHQHQTQ
401: HQPQVGMPPP PSGQKHPKFM DFNQQK
001: MEGGGRGPNQ TILSEIEHMP EAPRQRISHH RRARSETFFS GESIDDLLLF DPSDIDFSSL DFLNAPPPPQ QSQQQPQASP MSVDSEETSS NGVVPPNSLP
101: PKPEARFGRH VRSFSVDSDF FDDLGVTEEK FIATSSGEKK KGNHHHSRSN SMDGEMSSAS FNIESILASV SGKDSGKKNM GMGGDRLAEL ALLDPKRAKR
201: ILANRQSAAR SKERKIRYTG ELERKVQTLQ NEATTLSAQV TMLQRGTSEL NTENKHLKMR LQALEQQAEL RDALNEALRD ELNRLKVVAG EIPQGNGNSY
301: NRAQFSSQQS AMNQFGNKTN QQMSTNGQPS LPSYMDFTKR G
101: PKPEARFGRH VRSFSVDSDF FDDLGVTEEK FIATSSGEKK KGNHHHSRSN SMDGEMSSAS FNIESILASV SGKDSGKKNM GMGGDRLAEL ALLDPKRAKR
201: ILANRQSAAR SKERKIRYTG ELERKVQTLQ NEATTLSAQV TMLQRGTSEL NTENKHLKMR LQALEQQAEL RDALNEALRD ELNRLKVVAG EIPQGNGNSY
301: NRAQFSSQQS AMNQFGNKTN QQMSTNGQPS LPSYMDFTKR G
Arabidopsis Description
VIP1Transcription factor VIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MA75]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.