Factsheet for HORVU4Hr1G053410.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G191000.1	Wheat	nucleus, plastid	83.42	82.12
TraesCS1B01G193800.1	Wheat	nucleus	83.42	81.7
TraesCS1A01G186000.1	Wheat	plastid	82.63	80.31
HORVU3Hr1G109890.1	Barley	cytosol	12.37	75.81
OQU92255	Sorghum	nucleus	52.37	65.25
Zm00001d029711_P001	Maize	nucleus	64.74	61.96
Os10t0531900-01	Rice	nucleus	64.21	61.0
HORVU4Hr1G083000.1	Barley	nucleus	50.0	48.72
GSMUA_Achr1P08090_001	Banana	nucleus, plastid	44.21	36.05
HORVU7Hr1G056490.1	Barley	nucleus, plastid	46.05	33.91
CDY15909	Canola	plastid	36.05	30.86
Bra030314.1-P	Field mustard	plastid	36.84	30.43
CDX99610	Canola	nucleus	35.26	30.32
HORVU4Hr1G020540.1	Barley	nucleus	25.26	29.72
HORVU4Hr1G050190.1	Barley	nucleus	27.63	29.58
CDX82008	Canola	nucleus	28.42	29.03
Bra031172.1-P	Field mustard	nucleus	28.42	28.72
HORVU7Hr1G056230.2	Barley	nucleus	27.37	28.49
HORVU5Hr1G039870.5	Barley	nucleus, plastid	26.05	27.73
HORVU2Hr1G085560.4	Barley	nucleus, plastid	27.37	26.94
AT2G21230.3	Thale cress	nucleus	37.11	26.86
HORVU5Hr1G079160.11	Barley	vacuole	29.74	25.39
HORVU5Hr1G080140.1	Barley	nucleus, plastid	29.21	24.08
HORVU3Hr1G072770.1	Barley	nucleus	16.58	23.68
HORVU5Hr1G045690.1	Barley	nucleus	14.74	23.33
HORVU2Hr1G017820.1	Barley	nucleus	21.32	22.13
HORVU1Hr1G049310.2	Barley	nucleus	23.68	20.98
HORVU3Hr1G040920.8	Barley	nucleus	14.74	17.89
HORVU4Hr1G016340.4	Barley	nucleus, plastid	17.37	16.02
HORVU5Hr1G031130.2	Barley	mitochondrion	15.0	15.83
HORVU6Hr1G051110.4	Barley	nucleus	12.37	14.6

Protein Annotations

EnsemblPlants:HORVU4Hr1G053410.2	EnsemblPlantsGene:HORVU4Hr1G053410	Gene3D:1.20.5.170	ncoils:Coil	PANTHER:PTHR13690	PANTHER:PTHR13690:SF78
SEG:seg	UniParc:UPI000B462874	UniProt:A0A287P2M6	MapMan:15.5.4.1	:	:

Description

No Description!

Coordinates

chrchr4H:-:444185176..444187304

Molecular Weight (calculated)

35948.3 Da

IEP (calculated)

6.684

GRAVY (calculated)

-0.646

Length

380 amino acids

Sequence
(BLAST)

001: MGTTNELMHR HVQAAVPPLP TPGRGMAPGQ GEXXXXXXXX XPTPPSGAGS HSLHVADACM RMQDDSAPRK AHRRSRSDVP FGYFPPPSPK TESGWGLPGG
101: GAVGGDELFN AFMSMEGMDG LNSSDGDSRG SSMPPANGAD SSENXXXXXX XXXXXXXXXX XXXXXXXXXX XXXAAAAARH ARSLSMDSLM GKLSFSANGG
201: EPSKFSLEFG SGEFTPAEMK RIMADEKLAE MALADPKRVK XXXXXXXXXX RSKERRMRYI AELEHKVQIL QTEATTLSAQ LTHLQRDSSG LATHNNELKF
301: RLQAMEQQAQ LRDALNEALT GEVQRLKQSA TSERGGDAAS SGGLAQQMQL RCQNQMLEMH KQQQIPFYQL EQPEQTRESN

Best Arabidopsis Sequence Match ( AT2G21230.1 )
(BLAST)

001: MGGGGDTTDT NMMQRVNSSS GTSSSSIPKH NLHLNPALIR SHHHFRHPFT GAPPPPIPPI SPYSQIPATL QPRHSRSMSQ PSSFFSFDSL PPLNPSAPSV
101: SVSVEEKTGA GFSPSLPPSP FTMCHSSSSR NAGDGENLPP RKSHRRSNSD VTFGFSSMMS QNQKSPPLSS LERSISGEDT SDWSNLVKKE PREGFYKGRK
201: PEVEAAMDDV FTAYMNLDNI DVLNSFGGED GKNGNENVEE MESSRGSGTK KTNGGSSSDS EGDSSASGNV KVALSSSSSG VKRRAGGDIA PTGRHYRSVS
301: MDSCFMGKLN FGDESSLKLP PSSSAKVSPT NSGEGNSSAY SVEFGNSEFT AAEMKKIAAD EKLAEIVMAD PKRVKRILAN RVSAARSKER KTRYMAELEH
401: KVQTLQTEAT TLSAQLTHLQ RDSMGLTNQN SELKFRLQAM EQQAQLRDAL SEKLNEEVQR LKLVIGEPNR RQSGSSSSES KMSLNPEMFQ QLSISQLQHQ
501: QMQHSNQCST MKAKHTSND

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:B3H7M2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.