Factsheet for GSMUA_Achr3P03550_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G045690.1	Barley	nucleus	59.48	57.5
TraesCS5D01G148700.1	Wheat	nucleus	59.05	57.32
TraesCS5B01G142200.1	Wheat	nucleus	59.05	57.32
TraesCS5A01G143300.1	Wheat	nucleus	58.62	56.9
Zm00001d016154_P001	Maize	nucleus	60.78	55.95
GSMUA_Achr6P26930_001	Banana	nucleus	59.48	54.55
GSMUA_Achr9P06540_001	Banana	nucleus	57.33	54.51
Zm00001d053442_P001	Maize	nucleus	60.34	54.26
EES04836	Sorghum	nucleus	60.34	54.05
GSMUA_Achr7P25310_001	Banana	nucleus	63.36	53.26
GSMUA_Achr3P31390_001	Banana	nucleus	49.57	51.57
KRH27307	Soybean	plastid	59.91	48.77
GSMUA_Achr4P10560_001	Banana	nucleus	53.88	46.13
KRH22014	Soybean	nucleus, plastid	62.5	45.31
VIT_19s0014g01780.t01	Wine grape	nucleus	59.05	44.34
Solyc07g062710.2.1	Tomato	nucleus, plastid	56.47	43.38
PGSC0003DMT400032381	Potato	nucleus, plastid	53.88	43.25
GSMUA_Achr3P19170_001	Banana	nucleus	18.97	22.0
GSMUA_Achr8P29390_001	Banana	nucleus	33.62	21.31
GSMUA_Achr6P13040_001	Banana	nucleus	25.43	20.77
GSMUA_Achr9P00300_001	Banana	nucleus	32.76	20.21
GSMUA_Achr6P18130_001	Banana	nucleus	25.43	20.14
GSMUA_Achr11P...	Banana	nucleus	26.72	19.87
GSMUA_Achr10P...	Banana	nucleus	26.72	19.81
GSMUA_Achr2P18830_001	Banana	nucleus	24.57	19.79
GSMUA_Achr6P32530_001	Banana	nucleus	27.16	19.75
GSMUA_Achr3P19190_001	Banana	nucleus	27.59	18.77
GSMUA_AchrUn_...	Banana	nucleus	27.59	18.5
GSMUA_Achr3P02820_001	Banana	golgi	31.9	18.45
GSMUA_Achr10P...	Banana	nucleus	25.86	18.35
GSMUA_Achr5P25700_001	Banana	nucleus	28.02	18.31
GSMUA_Achr11P...	Banana	nucleus	28.45	17.65
GSMUA_Achr5P17400_001	Banana	nucleus	29.31	17.57
GSMUA_AchrUn_...	Banana	nucleus	28.88	16.79
GSMUA_Achr5P20200_001	Banana	nucleus	19.4	16.19
GSMUA_Achr5P29650_001	Banana	nucleus	25.86	15.75
GSMUA_Achr10P...	Banana	nucleus	22.41	15.48
GSMUA_Achr11P...	Banana	mitochondrion, nucleus	28.02	15.33
GSMUA_Achr11P...	Banana	nucleus	28.45	14.73
GSMUA_Achr8P12090_001	Banana	nucleus	28.45	13.95
GSMUA_Achr1P08090_001	Banana	nucleus, plastid	26.72	13.3
GSMUA_Achr3P12290_001	Banana	nucleus	28.45	13.2

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr3G03550_001	EnsemblPlants:GSMUA_Achr3P03550_001
EnsemblPlants:GSMUA_Achr3T03550_001	InterPro:IPR004827	UniProt:M0SBH3	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR13301	PANTHER:PTHR13301:SF48	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000295983A	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

bZIP transcription factor domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G03550_001]

Coordinates

chr3:+:2304009..2307177

Molecular Weight (calculated)

25987.8 Da

IEP (calculated)

9.474

GRAVY (calculated)

-0.554

Length

232 amino acids

Sequence
(BLAST)

001: MAQLPPKIPN AATDWHGSVH HKNFCMGTAD SWVDEFLDFS AAKRAAHRRS ASDSIAFLEA PVESVGVGGG HEFGRLDDDQ LMSMFSDEAP HSPSDAQNFD
101: PKRVKSRILA NRQSAQRSRV RKLQYISELE RSVTSLETEV SALSPRVAFL DQQRSLLTMG NSHLKQRIAA LAQDKIFKDA HQEALKKEIE RLRQVYYQQS
201: LKKMADATAT DTTLRASNGV TVDILRVIER PK

Best Arabidopsis Sequence Match ( AT2G42380.2 )
(BLAST)

001: MAQLPPKIPN MTQHWPDFSS QKLSPFSTPT ATAVATATTT VQNPSWVDEF LDFSASRRGN HRRSISDSIA FLEAPTVSIE DHQFDRFDDE QFMSMFTDDD
101: NLHSNPSHIN NKNNNVGPTG SSSNTSTPSN SFNDDNKELP PSDHNMNNNI NNNYNDEVQS QCKMEPEDGT ASNNNSGDSS GNRILDPKRV KRILANRQSA
201: QRSRVRKLQY ISELERSVTS LQAEVSVLSP RVAFLDHQRL LLNVDNSALK QRIAALSQDK LFKDAHQEAL KREIERLRQV YNQQSLTNVE NANHLSATGA
301: GATPAVDIKS SVETEQLLNV S

Arabidopsis Description

BZIP34Basic leucine zipper 34 [Source:UniProtKB/Swiss-Prot;Acc:F4IN23]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.