CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039383_P001	Maize	nucleus	63.84	91.32
TraesCS3D01G148200.1	Wheat	nucleus	56.07	75.74
TraesCS3B01G167500.1	Wheat	nucleus	52.67	74.32
TraesCS2B01G165700.1	Wheat	nucleus	54.61	73.29
TraesCS2D01G144300.1	Wheat	nucleus	54.37	73.2
TraesCS2A01G140900.1	Wheat	nucleus	53.4	71.9
GSMUA_Achr6P26930_001	Banana	nucleus	41.26	67.19
HORVU3Hr1G040920.8	Barley	nucleus	50.97	67.09
Os01t0211800-01	Rice	extracellular, nucleus	53.4	66.67
GSMUA_Achr9P06540_001	Banana	nucleus	39.08	65.98
TraesCS3A01G131900.1	Wheat	nucleus	49.76	64.47
EES04836	Sorghum	nucleus	36.16	57.53
EES01493	Sorghum	nucleus	37.62	56.16
KRH27307	Soybean	plastid	37.62	54.39
VIT_19s0014g01780.t01	Wine grape	nucleus	40.29	53.72
KRH22014	Soybean	nucleus, plastid	40.78	52.5
Solyc07g062710.2.1	Tomato	nucleus, plastid	37.38	50.99
PGSC0003DMT400032381	Potato	nucleus, plastid	35.44	50.52
KXG23197	Sorghum	mitochondrion	22.09	25.21
KXG28232	Sorghum	mitochondrion	20.39	23.46
EES06922	Sorghum	nucleus	17.72	22.6
OQU92641	Sorghum	nucleus	18.45	21.78
EER99183	Sorghum	nucleus	19.42	20.41
EES12438	Sorghum	nucleus	18.45	20.11
EES08023	Sorghum	nucleus	16.5	20.0
OQU90478	Sorghum	nucleus	18.2	19.84
EES15709	Sorghum	nucleus	16.5	19.48
OQU92255	Sorghum	nucleus	14.32	19.34
EES14151	Sorghum	nucleus	16.99	18.32
KXG40277	Sorghum	nucleus	18.45	17.63
EES15257	Sorghum	nucleus	19.66	16.46
EER97061	Sorghum	nucleus	18.69	15.4
OQU89248	Sorghum	nucleus	7.28	12.45
OQU83493	Sorghum	nucleus	12.86	6.94
OQU83785	Sorghum	plastid	8.5	5.42

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:8079521	UniProt:C5XL36	ncoils:Coil	EnsemblPlants:EES00074
ProteinID:EES00074	ProteinID:EES00074.2	GO:GO:0000977	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0045893	InterPro:IPR004827	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR13301
PANTHER:PTHR13301:SF134	SMART:SM00338	EnsemblPlantsGene:SORBI_3003G021800	SUPFAM:SSF57959	unigene:Sbi.21019	UniParc:UPI0009DC8718
RefSeq:XP_002454954.1	InterPro:bZIP	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:1869800..1871472

Molecular Weight (calculated)

44073.7 Da

IEP (calculated)

10.248

GRAVY (calculated)

-0.692

Length

412 amino acids

Sequence
(BLAST)

001: SQRRHGLAPA HPASSGIRSK QQKRELKKGE AARAIPGRHR AAPARVVVAL ATLPPGTSGT AGGRFRRCAT DPPFPRVALI PPNRTNARRG VPAMAQLPPK
101: IPTMAPAWPE FGGGHHHHHH QQQQRSPSVG TFLAAPMPPP PLHHPPPQQQ QPSWVDEFLD FSAAKRGAHR RSVSDSVAFL EAGPGDGNAG VGAHDFDRLD
201: DDQLLSMFSD DLQPPPPPTT TTAQAAPVAS SSSPSDHNSI NDEKTDRGEA EEAQSKCHGD ATADAAPASA APVDPKRVKR ILANRQSAQR SRVRKLQYIS
301: ELERSVTSLQ TEVSALSPRV AFLDHQRSLL TLGNSHLKQR IAALAQDKIF KDAHQEALRK EIERLRQIYQ QQSLKSGGGE APAPDAAPVC GDKDDMIGSS
401: EGTAAPALGP PS

Best Arabidopsis Sequence Match ( AT3G58120.1 )
(BLAST)

001: MAQLPPKIPT MTTPNWPDFS SQKLPSIAAT AAAAATAGPQ QQNPSWMDEF LDFSATRRGT HRRSISDSIA FLEPPSSGVG NHHFDRFDDE QFMSMFNDDV
101: HNNNHNHHHH HSINGNVGPT RSSSNTSTPS DHNSLSDDDN NKEAPPSDHD HHMDNNVANQ NNAAGNNYNE SDEVQSQCKT EPQDGPSANQ NSGGSSGNRI
201: HDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQTE VSVLSPRVAF LDHQRLLLNV DNSAIKQRIA ALAQDKIFKD AHQEALKREI ERLRQVYHQQ
301: SLKKMENNVS DQSPADIKPS VEKEQLLNV

Arabidopsis Description

BZIP61BZIP61 [Source:UniProtKB/TrEMBL;Acc:A0A178VLL5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.