CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029064_P001	Maize	nucleus	91.98	92.77
Os03t0336200-02	Rice	nucleus	82.52	87.54
HORVU4Hr1G050190.1	Barley	nucleus	81.66	80.28
TraesCS4D01G171700.2	Wheat	nucleus	81.38	79.78
TraesCS4B01G169600.1	Wheat	nucleus	81.38	79.78
TraesCS4A01G135600.2	Wheat	nucleus	81.09	79.49
GSMUA_Achr2P18830_001	Banana	nucleus	54.44	65.97
OQU90478	Sorghum	nucleus	70.49	65.08
GSMUA_Achr6P32530_001	Banana	nucleus	50.14	54.86
Bra000195.1-P	Field mustard	nucleus	40.69	42.52
EES08023	Sorghum	nucleus	35.53	36.47
EER99183	Sorghum	nucleus	38.97	34.69
EES15709	Sorghum	nucleus	34.67	34.67
EES12438	Sorghum	nucleus	36.39	33.6
OQU92255	Sorghum	nucleus	28.65	32.79
EES14151	Sorghum	nucleus	35.24	32.2
KXG40277	Sorghum	nucleus	36.1	29.23
CDY13830	Canola	nucleus, plastid	24.64	28.01
EES01493	Sorghum	nucleus	22.06	27.9
EES04836	Sorghum	nucleus	20.63	27.8
KRH35159	Soybean	nucleus	23.21	25.55
EES15257	Sorghum	nucleus	35.53	25.2
EER97061	Sorghum	nucleus	29.23	20.4
OQU89248	Sorghum	nucleus	14.04	20.33
EES00074	Sorghum	nucleus, plastid	21.78	18.45
CDY13829	Canola	cytosol	0.57	18.18
KXG23197	Sorghum	mitochondrion	18.62	18.01
EES06922	Sorghum	nucleus	16.05	17.34
KXG28232	Sorghum	mitochondrion	17.48	17.04
OQU83785	Sorghum	plastid	15.47	8.36
OQU83493	Sorghum	nucleus	17.48	7.98

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A1B6QNC4	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR004827	ProteinID:KXG39426.1	ProteinID:OQU92640.1	EnsemblPlants:OQU92641	ProteinID:OQU92641	ProteinID:OQU92641.1
PFAM:PF00170	PFscan:PS50217	PANTHER:PTHR13690	PANTHER:PTHR13690:SF84	SMART:SM00338	EnsemblPlantsGene:SORBI_3001G380700
SUPFAM:SSF57959	UniParc:UPI00081AB312	InterPro:bZIP	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:66872217..66876736

Molecular Weight (calculated)

37705.0 Da

IEP (calculated)

6.596

GRAVY (calculated)

-0.700

Length

349 amino acids

Sequence
(BLAST)

001: MQQPEHADPP GRAFPPPAAP ASAAARGAHH RRARSEVAFR LPDDLGLGGG GGPDGDAFDE IGSEDDLFST FMDIEKISSS GPSDRDRDRA AETSSPPRPK
101: HRHSSSVDGS GLFFSPGIGG GAGKDAAASL AEVMEAKKAM TPEQLAELAA IDPKRAKRIL ANRQSAARSK ERKARYITEL ERKVQTLQTE ATTLSAQLTL
201: FQRDTTGLSA ENAELKIRLQ AMEQQAQLRD ALNDALKQEL ERLKHATGEM TNSSETYNMR FQHVPYNSSF FPLSQQNASP HLGTTQLPPP YPPHPNVPNH
301: QMLSHPNTLP DIMQQESLGR LQGLDIGKGP LVVKSESSSI SASESSSTF

Best Arabidopsis Sequence Match ( AT2G40620.1 )
(BLAST)

001: MEDPSNPQPN QSNLSQCPPL ATAPTPAPVR GPYHRRAHSE VQFRLPEDLD LSEPFGGFDE LGSEDDLFCS YMDIEKLGSG SGSASDSAGP SAPRSDNPFS
101: AENGGAEAGN SRPRHRHSLS VDGSSTLESI EAKKAMAPDK LAELWVVDPK RAKRIIANRQ SAARSKERKA RYILELERKV QTLQTEATTL SAQLSLFQRD
201: TTGLSSENTE LKLRLQVMEQ QAKLRDALNE QLKKEVERLK FATGEVSPAD AYNLGMAHMQ YQQQPQQSFF QHHHQQQTDA QNLQQMTHQF HLFQPNNNQN
301: QSSRTNPPTA HQLMHHATSN APAQSHSYSE AMHEDHLGRL QGLDISSCGR GSNFGRSDTV SESSSTM

Arabidopsis Description

BZIP18bZIP transcription factor 18 [Source:UniProtKB/Swiss-Prot;Acc:O22873]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.