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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT2G13150.1 Thale cress plastid 8.64 25.19
AT2G12900.1 Thale cress plastid 8.38 24.24
AT2G12940.1 Thale cress plastid 8.77 22.79
OQU89248 Sorghum nucleus 6.94 21.99
OQU92255 Sorghum nucleus 8.77 21.97
EES15257 Sorghum nucleus 13.61 21.14
Zm00001d007364_P001 Maize nucleus 16.49 19.78
KXG40277 Sorghum nucleus 10.99 19.49
Bra031173.1-P Field mustard plastid 9.69 19.12
EES08023 Sorghum nucleus 8.51 19.12
EES01493 Sorghum nucleus 6.81 18.84
CDX82009 Canola plastid 9.42 18.8
CDY70502 Canola nucleus 9.29 18.39
CDY13828 Canola plastid 9.29 18.35
EER99183 Sorghum nucleus 9.16 17.86
OQU92641 Sorghum nucleus 7.98 17.48
EER97061 Sorghum nucleus 11.26 17.2
EES12438 Sorghum nucleus 8.51 17.2
OQU90478 Sorghum nucleus 8.51 17.2
EES04836 Sorghum nucleus 5.5 16.22
EES15709 Sorghum nucleus 7.33 16.05
EES14151 Sorghum nucleus 7.98 15.97
EES06922 Sorghum nucleus 6.15 14.55
EES00074 Sorghum nucleus, plastid 6.94 12.86
OQU83785 Sorghum plastid 10.86 12.85
KXG23197 Sorghum mitochondrion 5.76 12.19
KXG28232 Sorghum mitochondrion 5.5 11.73
Protein Annotations
EnsemblPlants:OQU83493EnsemblPlantsGene:SORBI_3005G125100Gene3D:1.20.5.170GO:GO:0003674GO:GO:0003700GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR004827
InterPro:bZIPncoils:CoilPANTHER:PTHR13690PANTHER:PTHR13690:SF76ProteinID:OQU83493ProteinID:OQU83493.1
SEG:segSMART:SM00338UniParc:UPI000B8B9677UniProt:A0A1Z5RI97MapMan:15.5.4.1:
Description
hypothetical protein
Coordinates
chr5:+:54720574..54723925
Molecular Weight (calculated)
77566.6 Da
IEP (calculated)
4.899
GRAVY (calculated)
-0.274
Length
764 amino acids
Sequence
(BLAST)
001: MEPNPSSSSA AWTSSPAAVL EHGEPSVHAT SPLLSPSFSP APCPGLLPAS GSGSESSSWY QQIPPSPAVA LGDGSLSVHA HATSSQSLPS SSSFPTAGTF
101: PMVGYDLFGN PEAAAASPLP TFLGGQFEQG ESSSMAASVL PECPSPGLFG FADEFAAWPS EEVSSSFFSP SSAGGLAPQS SDNLAGFAQL SSDYEMELLP
201: PIEEEEEIDV SAFLVSDPED QLPNASWMAS SPQMGGGGGG GASASWMAPG STGNNWPPML ATAAASTCTM KVSTSSGSMA CHYGGSSIGV ASSIGGMTKP
301: SSPVLPLVPP SSQGAGASSS NFNGFAQPSS SSVLAPLATN LQGPLLPVKQ EVMECVDATA RRRPDFISLV DDDEEDGLYQ DVIPCSIPGI NGWSRSGGGH
401: SQGPSFAPGA ESRYNVFGSW GSGSSSTASF APGSWLGSSS NSPSFGPGSW GGGSSSSPSF APGSWGSSSG SPSFAPGSWG GGGSSSSSPS FAPGSWGGGG
501: SSSPSFAPGS WGGGGSSSPS FAPGSWGCGS SSRSFAPGSW GSSSGSPSFA PSSLGGSSSS SPSFAPGSWG GSSSSRPSFA GSMPCFGGST PIDNCSSSMA
601: KLSIGGKMPS TSGLPPLPRC GIRSKKRGAG IVFTDPETAI IVKDKKLQEL LRRDPKKLKR LLYNREYSAV SKVRKVMHTT NLETTIVTLE EERKSLCAKL
701: QSLEEGTAAL MAEKTKMQII IGELEQQTML KDVVREGLRA EIQNLKHQKL TNKPSTTRRE PMHG
Best Arabidopsis Sequence Match ( AT4G38900.2 )
(BLAST)
001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE
Arabidopsis Description
Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.