Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82008 | Canola | nucleus | 90.91 | 2.69 |
| CDX99610 | Canola | nucleus | 72.73 | 1.81 |
| CDY15909 | Canola | plastid | 72.73 | 1.8 |
| CDX72732 | Canola | nucleus | 45.45 | 1.13 |
| CDY48939 | Canola | nucleus | 27.27 | 0.97 |
| CDX80717 | Canola | nucleus, plastid | 27.27 | 0.94 |
| CDY46864 | Canola | nucleus | 27.27 | 0.9 |
| CDY23807 | Canola | nucleus | 27.27 | 0.89 |
| CDY22407 | Canola | nucleus | 27.27 | 0.67 |
| Os03t0336200-02 | Rice | nucleus | 18.18 | 0.61 |
| Zm00001d029064_P001 | Maize | nucleus | 18.18 | 0.58 |
| OQU92641 | Sorghum | nucleus | 18.18 | 0.57 |
| HORVU4Hr1G050190.1 | Barley | nucleus | 18.18 | 0.56 |
| TraesCS4D01G171700.2 | Wheat | nucleus | 18.18 | 0.56 |
| TraesCS4A01G135600.2 | Wheat | nucleus | 18.18 | 0.56 |
| TraesCS4B01G169600.1 | Wheat | nucleus | 18.18 | 0.56 |
| CDY39913 | Canola | nucleus | 18.18 | 0.54 |
| CDY29162 | Canola | nucleus | 18.18 | 0.53 |
| CDX82009 | Canola | plastid | 18.18 | 0.52 |
| CDY70502 | Canola | nucleus | 18.18 | 0.52 |
| CDY13828 | Canola | plastid | 18.18 | 0.52 |
| CDY12108 | Canola | nucleus | 18.18 | 0.47 |
| CDX90298 | Canola | nucleus | 18.18 | 0.46 |
| CDY71925 | Canola | nucleus | 9.09 | 0.39 |
| CDX71974 | Canola | nucleus, plastid | 9.09 | 0.37 |
| CDY22561 | Canola | nucleus, plastid | 9.09 | 0.37 |
| CDY35379 | Canola | nucleus, plastid | 9.09 | 0.37 |
| CDY64520 | Canola | nucleus, plastid | 9.09 | 0.37 |
| CDX71000 | Canola | nucleus, plastid | 9.09 | 0.36 |
| CDX79872 | Canola | nucleus, plastid | 9.09 | 0.36 |
| CDY06053 | Canola | nucleus | 9.09 | 0.35 |
| GSMUA_Achr2P18830_001 | Banana | nucleus | 9.09 | 0.35 |
| CDX98266 | Canola | nucleus, plastid | 9.09 | 0.34 |
| KRH35159 | Soybean | nucleus | 9.09 | 0.32 |
| CDY19094 | Canola | nucleus | 9.09 | 0.31 |
| CDX86512 | Canola | nucleus | 9.09 | 0.31 |
| GSMUA_Achr6P32530_001 | Banana | nucleus | 9.09 | 0.31 |
| CDY15590 | Canola | nucleus | 9.09 | 0.31 |
| CDX80722 | Canola | nucleus | 9.09 | 0.31 |
| CDY06231 | Canola | nucleus | 9.09 | 0.31 |
| CDY09952 | Canola | nucleus | 9.09 | 0.3 |
| CDY30752 | Canola | nucleus | 9.09 | 0.3 |
| CDY07597 | Canola | nucleus | 9.09 | 0.3 |
| CDY24896 | Canola | nucleus | 9.09 | 0.29 |
| CDX93167 | Canola | nucleus | 9.09 | 0.29 |
| CDY06974 | Canola | nucleus | 9.09 | 0.28 |
| Zm00001d047519_P001 | Maize | nucleus | 9.09 | 0.28 |
| CDY23889 | Canola | nucleus | 9.09 | 0.28 |
| CDX79976 | Canola | nucleus | 9.09 | 0.28 |
| Zm00001d007172_P001 | Maize | plastid | 9.09 | 0.28 |
| TraesCS2D01G105400.1 | Wheat | nucleus | 9.09 | 0.27 |
| CDY56611 | Canola | nucleus | 9.09 | 0.27 |
| TraesCS2A01G105700.1 | Wheat | nucleus, plastid | 9.09 | 0.27 |
| CDY15381 | Canola | nucleus | 9.09 | 0.27 |
| TraesCS2B01G122700.1 | Wheat | nucleus | 9.09 | 0.27 |
| CDY10799 | Canola | nucleus | 9.09 | 0.27 |
| Zm00001d022442_P001 | Maize | nucleus | 9.09 | 0.27 |
| OQU90478 | Sorghum | nucleus | 9.09 | 0.26 |
| CDY15560 | Canola | nucleus | 9.09 | 0.26 |
| CDY47713 | Canola | nucleus | 9.09 | 0.26 |
| CDY10170 | Canola | nucleus | 9.09 | 0.25 |
| CDX86537 | Canola | nucleus | 9.09 | 0.25 |
| CDX70198 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY13830 | Canola | nucleus, plastid | 0.0 | 0.0 |
| HORVU2Hr1G017820.1 | Barley | nucleus | 0.0 | 0.0 |
| CDY35020 | Canola | nucleus | 0.0 | 0.0 |
| CDY44883 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY48943 | Canola | nucleus | 0.0 | 0.0 |
| CDY56238 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY13829 | EnsemblPlantsGene:GSBRNA2T00078274001 | ProteinID:CDY13829 | ProteinID:CDY13829.1 | UniParc:UPI0004EED74F | UniProt:A0A078FLN4 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA09g43310DBnaA09g43310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLN4]
Coordinates
chrLK032038:+:572713..572748
Molecular Weight (calculated)
1167.3 Da
IEP (calculated)
10.550
GRAVY (calculated)
-1.455
Length
11 amino acids
Sequence
(BLAST)
(BLAST)
1: MQRPNSSSSS S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.