Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19094 | Canola | nucleus | 77.57 | 90.25 |
| Bra021735.1-P | Field mustard | nucleus | 78.92 | 86.14 |
| CDY56611 | Canola | nucleus | 80.54 | 80.98 |
| CDY10799 | Canola | nucleus | 81.08 | 80.86 |
| AT2G31370.6 | Thale cress | nucleus | 82.16 | 76.38 |
| CDY15560 | Canola | nucleus | 67.03 | 65.09 |
| CDY47713 | Canola | nucleus | 68.11 | 64.29 |
| CDY10170 | Canola | nucleus | 68.11 | 64.12 |
| CDX86537 | Canola | nucleus | 67.57 | 63.61 |
| VIT_05s0102g01120.t01 | Wine grape | nucleus | 65.95 | 57.41 |
| KRH29611 | Soybean | nucleus | 56.22 | 54.03 |
| Solyc06g053350.2.1 | Tomato | plastid | 63.24 | 53.92 |
| GSMUA_Achr11P... | Banana | nucleus | 53.78 | 53.21 |
| KRH24606 | Soybean | nucleus | 56.22 | 52.39 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.68 | 51.63 |
| Zm00001d021189_P001 | Maize | nucleus | 51.35 | 51.35 |
| TraesCS5B01G301900.1 | Wheat | nucleus | 51.89 | 50.93 |
| GSMUA_Achr5P25700_001 | Banana | nucleus | 48.65 | 50.7 |
| TraesCS5A01G299400.1 | Wheat | nucleus | 51.62 | 50.66 |
| TraesCS5D01G308600.1 | Wheat | nucleus | 51.35 | 50.53 |
| Os09t0516200-01 | Rice | nucleus | 51.89 | 50.53 |
| EER99183 | Sorghum | nucleus | 53.24 | 50.26 |
| Zm00001d006127_P003 | Maize | nucleus | 50.27 | 50.13 |
| GSMUA_Achr11P... | Banana | nucleus | 60.0 | 49.55 |
| HORVU7Hr1G056230.2 | Barley | nucleus | 46.49 | 47.12 |
| TraesCS7A01G266400.1 | Wheat | nucleus | 45.68 | 46.3 |
| TraesCS7B01G166100.1 | Wheat | nucleus | 45.95 | 45.95 |
| TraesCS2A01G352100.1 | Wheat | nucleus | 45.14 | 44.77 |
| TraesCS7D01G268400.1 | Wheat | nucleus | 44.32 | 44.57 |
| Zm00001d031697_P001 | Maize | nucleus | 29.73 | 44.18 |
| Zm00001d003180_P001 | Maize | nucleus | 43.24 | 43.36 |
| HORVU5Hr1G079160.11 | Barley | vacuole | 51.89 | 43.15 |
| EES12438 | Sorghum | nucleus | 44.05 | 43.12 |
| HORVU2Hr1G085560.4 | Barley | nucleus, plastid | 44.32 | 42.49 |
| EES14151 | Sorghum | nucleus | 42.7 | 41.36 |
| Zm00001d052717_P001 | Maize | nucleus | 41.35 | 39.95 |
| CDY48943 | Canola | nucleus | 25.68 | 39.42 |
| CDY35020 | Canola | nucleus | 18.65 | 39.2 |
| CDX86512 | Canola | nucleus | 32.43 | 37.74 |
| CDY15590 | Canola | nucleus | 32.7 | 37.69 |
| CDY06231 | Canola | nucleus | 32.7 | 37.23 |
| CDY06974 | Canola | nucleus | 35.41 | 37.22 |
| CDX93167 | Canola | nucleus | 34.32 | 37.03 |
| CDY09952 | Canola | nucleus | 32.7 | 36.89 |
| CDY23889 | Canola | nucleus | 34.32 | 35.77 |
| CDX80722 | Canola | nucleus | 31.08 | 35.71 |
| CDX79976 | Canola | nucleus | 34.05 | 35.39 |
| CDY71925 | Canola | nucleus | 23.51 | 34.25 |
| CDY24896 | Canola | nucleus | 31.08 | 33.92 |
| CDY30752 | Canola | nucleus | 29.73 | 33.33 |
| CDY07597 | Canola | nucleus | 29.46 | 32.63 |
| CDY13830 | Canola | nucleus, plastid | 25.95 | 31.27 |
| CDY15909 | Canola | plastid | 32.97 | 27.48 |
| CDX82008 | Canola | nucleus | 27.57 | 27.42 |
| CDX99610 | Canola | nucleus | 31.89 | 26.7 |
| CDX72732 | Canola | nucleus | 31.62 | 26.53 |
| CDY12108 | Canola | nucleus | 30.0 | 26.06 |
| CDY22407 | Canola | nucleus | 31.08 | 25.84 |
| CDX90298 | Canola | nucleus | 30.27 | 25.57 |
| CDY22561 | Canola | nucleus, plastid | 18.38 | 25.37 |
| CDY64520 | Canola | nucleus, plastid | 18.65 | 25.27 |
| CDX71974 | Canola | nucleus, plastid | 18.11 | 25.09 |
| CDX71000 | Canola | nucleus, plastid | 18.92 | 25.09 |
| CDX79872 | Canola | nucleus, plastid | 18.92 | 25.0 |
| CDY35379 | Canola | nucleus, plastid | 18.11 | 25.0 |
| CDY06053 | Canola | nucleus | 18.92 | 24.65 |
| CDY56238 | Canola | extracellular | 8.65 | 23.88 |
| CDX98266 | Canola | nucleus, plastid | 18.65 | 23.15 |
| CDY46864 | Canola | nucleus | 18.38 | 20.36 |
| CDY23807 | Canola | nucleus | 18.38 | 20.24 |
| CDX82009 | Canola | plastid | 19.73 | 19.06 |
| CDY70502 | Canola | nucleus | 19.46 | 18.65 |
| CDY39913 | Canola | nucleus | 18.65 | 18.6 |
| CDY29162 | Canola | nucleus | 18.65 | 18.45 |
| CDY13828 | Canola | plastid | 19.19 | 18.35 |
| CDY48939 | Canola | nucleus | 14.86 | 17.8 |
| CDX80717 | Canola | nucleus, plastid | 14.86 | 17.19 |
| CDX70198 | Canola | mitochondrion, nucleus | 11.89 | 14.33 |
| CDY44883 | Canola | mitochondrion, nucleus | 11.35 | 13.73 |
| CDY13829 | Canola | cytosol | 0.27 | 9.09 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078FQC6 | UniProt:A0A078FQC6 | EnsemblPlants:CDY15381 | ProteinID:CDY15381 |
| ProteinID:CDY15381.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00085684001 | InterPro:IPR004827 | PFAM:PF00170 | PFscan:PS50217 | PANTHER:PTHR13690 |
| PANTHER:PTHR13690:SF79 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EE54DB | InterPro:bZIP | SEG:seg |
Description
BnaC04g42420DBnaC04g42420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQC6]
Coordinates
chrLK032054:+:524425..526488
Molecular Weight (calculated)
41605.7 Da
IEP (calculated)
6.856
GRAVY (calculated)
-0.933
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKEKSPAAP CGGRLPPPSP SGRSSPFSDA NRLSHDMSRM LEHPPKKIGH RRAHSEILTL PDDLSFDFDL GVVGGSADVP SFSDDTEGGD LMSMYLDMDK
101: FNSSTATSSA QVGEPSGTAW KNEPMMPQNS FGERPRVRHQ HSHSMDGTLN ISEMLMSGNE EDSVVDAKKS MSAAKLAELA LVDPKRAKRI WANRQSAARS
201: KERKTRYIFE LERKVQTLQT EATTLSAQLT LLQRDANGLT VENNELKLRL QTMEQRVQLQ DELNEALKEE IHHLKALTAQ VASNGASSAM NYGSFGSNQQ
301: FYSNNQTMLA AQQLQQLQIH SQKQHQQQQQ QQQQEFQYQQ QQFLHHRLGQ QEQRNGSGEM RKQKPDQMES
101: FNSSTATSSA QVGEPSGTAW KNEPMMPQNS FGERPRVRHQ HSHSMDGTLN ISEMLMSGNE EDSVVDAKKS MSAAKLAELA LVDPKRAKRI WANRQSAARS
201: KERKTRYIFE LERKVQTLQT EATTLSAQLT LLQRDANGLT VENNELKLRL QTMEQRVQLQ DELNEALKEE IHHLKALTAQ VASNGASSAM NYGSFGSNQQ
301: FYSNNQTMLA AQQLQQLQIH SQKQHQQQQQ QQQQEFQYQQ QQFLHHRLGQ QEQRNGSGEM RKQKPDQMES
001: MDKEKSPAPP CGGLPPPSPS GRCSAFSEAG PIGHGSDANR MSHDISRMLD NPPKKIGHRR AHSEILTLPD DLSFDSDLGV VGNAADGASF SDETEEDLLS
101: MYLDMDKFNS SATSSAQVGE PSGTAWKNET MMQTGTGSTS NPQNTVNSLG ERPRIRHQHS QSMDGSMNIN EMLMSGNEDD SAIDAKKSMS ATKLAELALI
201: DPKRAKRIWA NRQSAARSKE RKTRYIFELE RKVQTLQTEA TTLSAQLTLL QRDTNGLTVE NNELKLRLQT MEQQVHLQDE LNEALKEEIQ HLKVLTGQVA
301: PSALNYGSFG SNQQQFYSNN QSMQTILAAK QFQQLQIHSQ KQQQQQQQQQ QQHQQQQQQQ QQYQFQQQQM QQLMQQRLQQ QEQQNGVRLK PSQAQKEN
101: MYLDMDKFNS SATSSAQVGE PSGTAWKNET MMQTGTGSTS NPQNTVNSLG ERPRIRHQHS QSMDGSMNIN EMLMSGNEDD SAIDAKKSMS ATKLAELALI
201: DPKRAKRIWA NRQSAARSKE RKTRYIFELE RKVQTLQTEA TTLSAQLTLL QRDTNGLTVE NNELKLRLQT MEQQVHLQDE LNEALKEEIQ HLKVLTGQVA
301: PSALNYGSFG SNQQQFYSNN QSMQTILAAK QFQQLQIHSQ KQQQQQQQQQ QQHQQQQQQQ QQYQFQQQQM QQLMQQRLQQ QEQQNGVRLK PSQAQKEN
Arabidopsis Description
POSF21AT2G31370 protein [Source:UniProtKB/TrEMBL;Acc:B9DGB1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.