Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- cytosol 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71974 | Canola | nucleus, plastid | 82.09 | 41.2 |
| CDY06053 | Canola | nucleus | 82.84 | 39.08 |
| CDX98266 | Canola | nucleus, plastid | 84.33 | 37.92 |
| Bra007380.1-P | Field mustard | nucleus | 83.58 | 35.22 |
| CDY22561 | Canola | nucleus, plastid | 68.66 | 34.33 |
| AT3G58120.1 | Thale cress | nucleus | 83.58 | 34.04 |
| CDY35379 | Canola | nucleus, plastid | 67.16 | 33.58 |
| CDX79872 | Canola | nucleus, plastid | 70.15 | 33.57 |
| CDX71000 | Canola | nucleus, plastid | 69.4 | 33.33 |
| CDY64520 | Canola | nucleus, plastid | 65.67 | 32.23 |
| KRH22317 | Soybean | nucleus | 70.15 | 30.23 |
| KRH27013 | Soybean | nucleus | 70.9 | 29.69 |
| VIT_12s0028g02590.t01 | Wine grape | nucleus, plastid | 63.43 | 28.81 |
| KRH25692 | Soybean | nucleus, plastid | 67.91 | 27.58 |
| PGSC0003DMT400024289 | Potato | nucleus | 61.94 | 27.39 |
| KRH55826 | Soybean | nucleus, plastid | 69.4 | 27.35 |
| Solyc12g010800.1.1 | Tomato | nucleus | 56.72 | 24.84 |
| PGSC0003DMT400020206 | Potato | nucleus | 55.22 | 24.26 |
| Solyc07g053450.2.1 | Tomato | nucleus | 46.27 | 21.83 |
| CDY35020 | Canola | nucleus | 19.4 | 14.77 |
| CDY48943 | Canola | nucleus | 20.9 | 11.62 |
| CDY23807 | Canola | nucleus | 27.61 | 11.01 |
| CDY46864 | Canola | nucleus | 26.87 | 10.78 |
| CDY15590 | Canola | nucleus | 23.88 | 9.97 |
| CDY06231 | Canola | nucleus | 23.88 | 9.85 |
| CDY09952 | Canola | nucleus | 23.88 | 9.76 |
| CDX86512 | Canola | nucleus | 23.13 | 9.75 |
| CDY48939 | Canola | nucleus | 22.39 | 9.71 |
| CDY39913 | Canola | nucleus | 26.87 | 9.7 |
| CDY29162 | Canola | nucleus | 26.87 | 9.63 |
| CDY44883 | Canola | mitochondrion, nucleus | 21.64 | 9.48 |
| CDX70198 | Canola | mitochondrion, nucleus | 21.64 | 9.45 |
| CDY24896 | Canola | nucleus | 23.88 | 9.44 |
| CDY56611 | Canola | nucleus | 25.37 | 9.24 |
| CDY10799 | Canola | nucleus | 25.37 | 9.16 |
| CDY19094 | Canola | nucleus | 20.9 | 8.81 |
| CDX80717 | Canola | nucleus, plastid | 20.9 | 8.75 |
| CDX80722 | Canola | nucleus | 20.9 | 8.7 |
| CDY15560 | Canola | nucleus | 24.63 | 8.66 |
| CDY15381 | Canola | nucleus | 23.88 | 8.65 |
| CDY06974 | Canola | nucleus | 22.39 | 8.52 |
| CDY30752 | Canola | nucleus | 20.9 | 8.48 |
| CDX93167 | Canola | nucleus | 21.64 | 8.45 |
| CDY23889 | Canola | nucleus | 22.39 | 8.45 |
| CDX86537 | Canola | nucleus | 24.63 | 8.4 |
| CDX79976 | Canola | nucleus | 21.64 | 8.15 |
| CDY13830 | Canola | nucleus, plastid | 18.66 | 8.14 |
| CDY47713 | Canola | nucleus | 23.13 | 7.91 |
| CDY10170 | Canola | nucleus | 23.13 | 7.89 |
| CDY07597 | Canola | nucleus | 17.91 | 7.19 |
| CDX82008 | Canola | nucleus | 18.66 | 6.72 |
| CDY12108 | Canola | nucleus | 20.9 | 6.57 |
| CDX72732 | Canola | nucleus | 20.9 | 6.35 |
| CDY22407 | Canola | nucleus | 20.15 | 6.07 |
| CDX90298 | Canola | nucleus | 19.4 | 5.94 |
| CDY71925 | Canola | nucleus | 11.19 | 5.91 |
| CDX99610 | Canola | nucleus | 19.4 | 5.88 |
| CDY15909 | Canola | plastid | 19.4 | 5.86 |
| CDY13828 | Canola | plastid | 14.18 | 4.91 |
| CDX82009 | Canola | plastid | 12.69 | 4.44 |
| CDY70502 | Canola | nucleus | 12.69 | 4.4 |
| CDY13829 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY56238 | EnsemblPlantsGene:GSBRNA2T00018001001 | ncoils:Coil | PANTHER:PTHR13301 | PANTHER:PTHR13301:SF134 | ProteinID:CDY56238 |
| ProteinID:CDY56238.1 | UniParc:UPI0004EEF135 | UniProt:A0A078J086 | MapMan:35.1 | : | : |
Description
BnaA07g37910DBnaA07g37910D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078J086]
Coordinates
chrLK033471:+:3..1258
Molecular Weight (calculated)
15701.9 Da
IEP (calculated)
10.241
GRAVY (calculated)
-0.629
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: KTEAFQLVNF YFLLYVFNMK NQLQKKKETK FNQKLERSVT SLQTEVSVLS PRVAFLDHQR LLLNVDNSAI KQRIAALAQD KIFKDAHQEA LKREIERLRQ
101: VYHQQSLKKM ENNVSDQSPA DIKPSVEKEQ LLNA
101: VYHQQSLKKM ENNVSDQSPA DIKPSVEKEQ LLNA
001: MAQLPPKIPN MTQHWPDFSS QKLSPFSTPT ATAVATATTT VQNPSWVDEF LDFSASRRGN HRRSISDSIA FLEAPTVSIE DHQFDRFDDE QFMSMFTDDD
101: NLHSNPSHIN NKNNNVGPTG SSSNTSTPSN SFNDDNKELP PSDHNMNNNI NNNYNDEVQS QCKMEPEDGT ASNNNSGDSS GNRILDPKRV KRILANRQSA
201: QRSRVRKLQY ISELERSVTS LQAEVSVLSP RVAFLDHQRL LLNVDNSALK QRIAALSQDK LFKDAHQEAL KREIERLRQV YNQQSLTNVE NANHLSATGA
301: GATPAVDIKS SVETEQLLNV S
101: NLHSNPSHIN NKNNNVGPTG SSSNTSTPSN SFNDDNKELP PSDHNMNNNI NNNYNDEVQS QCKMEPEDGT ASNNNSGDSS GNRILDPKRV KRILANRQSA
201: QRSRVRKLQY ISELERSVTS LQAEVSVLSP RVAFLDHQRL LLNVDNSALK QRIAALSQDK LFKDAHQEAL KREIERLRQV YNQQSLTNVE NANHLSATGA
301: GATPAVDIKS SVETEQLLNV S
Arabidopsis Description
BZIP34Basic leucine zipper 34 [Source:UniProtKB/Swiss-Prot;Acc:F4IN23]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.